Gene Mnod_6376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6376 
Symbol 
ID7301581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6481508 
End bp6482695 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content73% 
IMG OID643603962 
Productcystathionine beta-lyase 
Protein accessionYP_002501465 
Protein GI220926163 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01324] cystathionine beta-lyase, bacterial 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA CGCCCCCCCG CGATCCGAGC CGTCTCGGCG AACGCACCCG CCTCGTCCAT 
GCCGGCCGCG ACCCCTCGCG CCAGCACGGC TTCGTGAACA CGCCGATCTA TCGCGGCTCG
ACCGTGCTCT ACGAGAGCTA CGACGCCCTG CAGCACCGGC GGGCGGAATA CACCTACGGG
ACGGCCGGCA CGCCGACGAC GCGGGCGCTG GAGCAGGCCT GGACGCAGCT CGCGGGCGCC
GCCGGCACCG TGCTGACACC CTCCGGGCTC GCGGCGGTCA CGGTCGGGCT CCTCGCCTGC
CTCAAGGCGG GCGACCACCT GCTGGTGACG GATTCCGCCT ACCGGCCGAC CCGCGCCTTC
TGCGACGGGT TCCTGGCCCG GTTCGGGGTC GAGACCACCT ATTACGATCC GACGATCGGG
GCGGGCATCG CCGAGCTGAT GCGCGGCAAC ACCGCGGCGG TGCTCACCGA GGCGCCGGGC
TCGCAGAGCC TCGAGATGCA GGACATCCCG GCCATCGCCG CCGTGGCCCA TGCCCGGGGC
GCCTGCGTGC TCATGGACAA TACCTGGGCG ACGCCCCTGC TCTTCCCGCC GCACGAGCGC
GGCGTCGACA TCGCCATCGA GGCCGGCACC AAGTACCTGT CGGGCGGCTC GGACCTGCTC
CTCGGCCTCA CCTCCGCCAA TGCGCAATAT TGGCCGGCCC TCCAGCGCAC CTTCGCGCTC
TTCGCCATGT GCGCGGGGCC GGAGGACGTC TTCCTCGCCC TGCGGGGCCT GCGCACCCTG
CCGCTGCGTC TCGCCGAGCA CGGGCGGCAG GCGCTTGCCA TGGCGGAGTG GCTGAAGGCC
CGGCCCGAGG TGGCGCGCGT GCTCCACCCG GCCCTGCCGG AGGATCCCGG CCACGCCATC
TGGACCCGCG ACTTCAAGGG CGCCTCGGGC CTGTTCTCGG TGATCCTGAA GCCCTGCTCG
GAGGCGGCGG TCGCCGCGAT GCTGGACGGG CTCGAACTCT TCGGGATGGG CTTCTCCTGG
GGCGGCTTCG AGAGCCTCGT CATCCCGTTC GACTGCCGGA CCTACCGCAC CGCCACCGCC
TGGGCCCCGG GCGGGCCGGC CCTGCGCTTC CACATCGGGC TGGAGGATCT GGAGGACCTG
AAGCGGGACC TCGATGCGGG CTTCGCCCGG CTGCGGGCGG CCGGGTGA
 
Protein sequence
MSTTPPRDPS RLGERTRLVH AGRDPSRQHG FVNTPIYRGS TVLYESYDAL QHRRAEYTYG 
TAGTPTTRAL EQAWTQLAGA AGTVLTPSGL AAVTVGLLAC LKAGDHLLVT DSAYRPTRAF
CDGFLARFGV ETTYYDPTIG AGIAELMRGN TAAVLTEAPG SQSLEMQDIP AIAAVAHARG
ACVLMDNTWA TPLLFPPHER GVDIAIEAGT KYLSGGSDLL LGLTSANAQY WPALQRTFAL
FAMCAGPEDV FLALRGLRTL PLRLAEHGRQ ALAMAEWLKA RPEVARVLHP ALPEDPGHAI
WTRDFKGASG LFSVILKPCS EAAVAAMLDG LELFGMGFSW GGFESLVIPF DCRTYRTATA
WAPGGPALRF HIGLEDLEDL KRDLDAGFAR LRAAG