| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6093 |
|---|
| Symbol | |
|---|
| ID | 7305587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 6207189 |
|---|
| End bp | 6208775 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643603714 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002501221 |
|---|
| Protein GI | 220925919 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCC GCGACCTCCT CGCGGCCCTC GCCGCCGCCT CCCTCGCCGG GCCCGCCCGC
GCGGCGGGTT CCCCCGTCTA TCGCCGGGGC AACGGGGCGG ATCCGGAGAC GCTCGACCCG
CACAAGACCT CCACGCTGGC GGAGGCCACG ATCCTGCTCG ACCTCTTCGA GGGCCTGACC
TGCTACGACG CAGGCGGCAA TCTGGTGGCG GGAGCGGCGG AACGCTGGTC CACTACGCCT
GACGGGCTGA CCTGGACCTT CACGCTGCGG CCGGAGGGCC GCTGGTCGAA TGGCGACCCG
GTTGTGGCGG AGGATTTCTT GGCCGGCCTG CGCCGGGTGC TGAACCCGGC GACGGGCGCC
AAATACGCGA GCGTGCTGTT TCCGATCCGC CGGGCGGAGG CGGTGAATCG CAGCGCGGCT
CCGGTGGAGG AACTCGGCGT GCGGGCGCCC GATCCGCGCA GGCTGGTGAT CGAACTCGAG
CAGCCGACCC CCTACCTCCT CGAATTGATG ACGCATCAGG CGAGCACGCC GGTGCACCGG
CCCTCGCTCG CGCGCCACGG CGACGCCTTC AGCCGGCCCG GGAACCTCGT CTCGAACGGC
GCCTACCTGC TGCAGGATGT CTCGCCGAAC GACCGGATCA CGGCCGTGCG CAACCCGCAT
TACCGCGACG CGCCGAGCGT GCGGATCGGC CAAGTGGAGT ACATCCCGAC CCCGGACCTC
GCGGCGGCGG TGCGGCGCTT CGCGGCGGGC GAGATCGATT CCCTCGACGA CCTGCCGGCC
GACCAGATCA AGGCGCTGAA GGCGCGCTTC GGGCCGCAGG TCTGGCTCAC GCCGGCGCTC
GGCGTGCTGG CGCTGATGGT GAACCTGCGG AAAAGCCCTC TGGGCGACCG GCGAGTGCGC
CAAGCCCTCT CGCTCGCCAT CGACCGCGAG TTCCTGGCCG AGGCGGTCTG GGGCGAGACG
ATGCTGCCGG CCTATTCCCT CACGCCGGCT GGGCTCGACA ATGCCCTGCC GCCGCCCGAG
ATGCCGGGCC GGGAGCTGTC GCCCCTGGAG CGGGAGGACC GGGCGGTGGC CCTGCTGCGG
CAGGCCGGCT TCGGGCCGGG CGCGACGCCG CTCACGGTCG AGATCCGCTA CAACACCACC
GACAACAACC GCAACATGAT GGTGGCGATC GCCGATATGT GGCGCGTCCT CAACGTGAGG
ACGAGCTTCG TCAACACGGA TGCGAAGACC CATTTCGCCC ATTTGCGCGA CGGCGGGCCA
TTCGACCTCG CCCGGATGAG CTGGATCGCC GATTATTCCG ACCCGCAGAA CTTCCTGTTC
CTGGTCGAGA GCGGCAATGA CGGCTTCAAC TCGGGCCACT ACGCCAATCC GGCCTATGAC
GCGCTGATGC GGGAGGCGGC GGGGACGGTC GATCTGGAGC GGCGCGCCGG TCTCCTCTAC
CGGGCCGAGG AGATCTTTCT GGCCGACCTG CCCTGGATCC CGCTGCTGCA TTACCGGCAC
AAGCACATGG TGGCGCCGCG CCTCAAGGGG ATGCAGCCCA ACATCCGCGG CGTCGCGCCG
ACGCGCTATC TGTGGCTCGA CGGATGA
|
|---|
| Protein sequence | MRRRDLLAAL AAASLAGPAR AAGSPVYRRG NGADPETLDP HKTSTLAEAT ILLDLFEGLT
CYDAGGNLVA GAAERWSTTP DGLTWTFTLR PEGRWSNGDP VVAEDFLAGL RRVLNPATGA
KYASVLFPIR RAEAVNRSAA PVEELGVRAP DPRRLVIELE QPTPYLLELM THQASTPVHR
PSLARHGDAF SRPGNLVSNG AYLLQDVSPN DRITAVRNPH YRDAPSVRIG QVEYIPTPDL
AAAVRRFAAG EIDSLDDLPA DQIKALKARF GPQVWLTPAL GVLALMVNLR KSPLGDRRVR
QALSLAIDRE FLAEAVWGET MLPAYSLTPA GLDNALPPPE MPGRELSPLE REDRAVALLR
QAGFGPGATP LTVEIRYNTT DNNRNMMVAI ADMWRVLNVR TSFVNTDAKT HFAHLRDGGP
FDLARMSWIA DYSDPQNFLF LVESGNDGFN SGHYANPAYD ALMREAAGTV DLERRAGLLY
RAEEIFLADL PWIPLLHYRH KHMVAPRLKG MQPNIRGVAP TRYLWLDG
|
|---|
| |