Gene Mnod_6088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6088 
Symbol 
ID7305582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6201169 
End bp6202389 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content70% 
IMG OID643603709 
Productbeta-lactamase 
Protein accessionYP_002501216 
Protein GI220925914 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.496561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGAGA TCTCCACTCC CCCCGAGGCG GTCGGCCTCT CCGCGGAACG CCTGGAGCGC 
ATCGATCCAT GGATGCGCCG CTACGTGGAG GCGGGCAAGC TCGCGGGCCT CTCGGTGACG
GTGGCGCGGC GCGGCGAGGT GGTGTTCTCG CGGGCGCACG GCCTCGCCGA CCTCGCCCGC
GAGCGGCCGA TGGCGGACGA CACCATCGTG CGCGTCTACT CGATGACGAA GCCGCTGACC
TCGGTCGCCG TGATGATGCT CTACGAGGAG GGCCGCTTCC AGCTCGACGA TCCGGTCACC
CGCTTCCTGC CCGAGTTCCG CGACATGCGG GTGCTCACGG GCGGCAGCCG CAAGAAGTGG
GAGAGCGTGC CGGCCGAGCG CGACATCACC ATCCGCGACC TCCTCACCCA TACCTCGGGC
CTCACCTACG GCTTCATGGA ATCGACCCTC GTCGACGCCA TGTACAGGGA CGAGGGCATC
GACTTCCAGA CCGCCGAGAC CTCGCTCGCC GACGTGGTGG CCAGGGCCGC CTCCCTGCCG
CTCCTGTCCC AGCCCGGGGC GGAGTGGAAC TACAGCATCG CCACCGACGT GCTCGGGCAC
CTCGTGGCGG TGGTCTCGGG GGTGCCCTTC GACGAATTCC TCCGCAGGCG GATCATCCAT
CCGCTCGGCA TGGTCGACAC CGATTTCCAC GTGCCGGCGG AGAAGCTGCC GCGCTTCGCC
TCGAACTACG CCTATGGCCA GGACGGGCAG CTCACGCTCA TCGACGACGC GATCGAGGGC
CGCTACGCCC ACCCGCGGGC GGTGCCCTCG GGCGGGGGCG GCCTCGTCTC GACGGCGGCC
GATTACGCGC GCTTCTGCCG CTTCATCCTC GACCGCGGCG AGCTCGACGG CGTGCGGCTC
CTCGGCCGCA AGACCGTCGC GCTGATGACC ACGAACCATC TGCCCGGCGA CCTCGCCGCG
CTGGGCCAGC CCCGCTTCGC CGAGTCGAGC TTCAGCGGCA TCGGCTTCGG GCTCGGCTTC
TCGGTCATGC TCGATCCGGC CAAGGCGCAG ATCGTGGGCA CGCCGGGCGA GGTCGCCTGG
GGCGGCGCCG CCTCGACGGC CTTCTGGATC GACCCCGTGG AGGATCTCTT CGTGATCCTC
CTCACGCAGC TCATGCCCTC CTCGGCGCTG CCGCTGCGAC GCGAGCTGCG CGTCCTGACC
TATTCGGCCC TCGTCGATTA G
 
Protein sequence
MPEISTPPEA VGLSAERLER IDPWMRRYVE AGKLAGLSVT VARRGEVVFS RAHGLADLAR 
ERPMADDTIV RVYSMTKPLT SVAVMMLYEE GRFQLDDPVT RFLPEFRDMR VLTGGSRKKW
ESVPAERDIT IRDLLTHTSG LTYGFMESTL VDAMYRDEGI DFQTAETSLA DVVARAASLP
LLSQPGAEWN YSIATDVLGH LVAVVSGVPF DEFLRRRIIH PLGMVDTDFH VPAEKLPRFA
SNYAYGQDGQ LTLIDDAIEG RYAHPRAVPS GGGGLVSTAA DYARFCRFIL DRGELDGVRL
LGRKTVALMT TNHLPGDLAA LGQPRFAESS FSGIGFGLGF SVMLDPAKAQ IVGTPGEVAW
GGAASTAFWI DPVEDLFVIL LTQLMPSSAL PLRRELRVLT YSALVD