Gene Mnod_6087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6087 
Symbol 
ID7305581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6200039 
End bp6201040 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID643603708 
Product2-nitropropane dioxygenase NPD 
Protein accessionYP_002501215 
Protein GI220925913 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTTC CCGACCGCCT CGCCGACGCC CTCGCGCTCC CCGTGGTCGC CTCGCCGATG 
TTCATCGTCT CGGGGCCGGA TCTCGTGATC GCGCAATGCC TCGGGGGCAT CGTCGGCTCC
TTCCCGGCGC TCAACGCCCG GCCGAAGGAG GCCCTGGACG ATTGGCTCAC GCGGATCGAC
GGGGCGCTCG CCGCCGCCAT GGCCGCCGAG CCCGGCCGGA TCGTGGCGCC CTATGCAGTC
AACCAGATCG TCCACGCCTC CAACGACCGG CTGGAGCACG ACCTCGCGGT CTGCGCCAGG
CACCGGGTGC CGATCATCAT CACGTCGCTG CGCGCGCCGG ATGCGGTGGT GTCGGCGGTG
CACGGCTGGG GCGGCCTCGT CTTCCACGAC GTCACCACCG TGCGCCACGC CGAGAAGGCC
CTGGAGGCCG GGGTCGACGG GCTGATCCTG GTCTGCGCCG GGGCCGGGGG GCATGCCGGG
ACGCTGAGCC CCTTCGCCCT CGTGGGCGAG GTGCGCCGCT TCTACGACGG GCCGCTCGTC
CTCTCGGGGG CCATCACCAC GGGCTCGGCC ATCCTCGCCG CACAGGCGAT GGGCGCCGAC
CTCGCCTATA TGGGCACCCG CTTCATCGCC ACCGCCGAGG CGAACGCCGC CCCGGCCTAC
AAGGACATGA TCGTCGCGAC GCGGGCGGCG GACGTGGTCT ACACGCCCTT CTTCACCGGC
GTGTCCGGCA ATTACCTCAA GCCGAGCGTC GTGGCGGCGG GCCTCGACCC GGACGCCCTG
CCGGATTCCG ACAAGAGCCG GATGGATTTC GGCTCCGGCC GCACCAAGGC GTGGCGCGAC
ATCTGGGGTG CGGGCCAGGG CGTGGGCACC ATCGACGACG TGCTCCCTGC CGCCGAGGTG
ATCGCGCGGC TCAAGCGCGA ATACGCGGCG GCACGGGAGG CGCTCTTGTC CCGCGCCGGG
AATCCCTGCC GGGAAATCCT GCCGACGAAC CCCGCCGAAT AA
 
Protein sequence
MSLPDRLADA LALPVVASPM FIVSGPDLVI AQCLGGIVGS FPALNARPKE ALDDWLTRID 
GALAAAMAAE PGRIVAPYAV NQIVHASNDR LEHDLAVCAR HRVPIIITSL RAPDAVVSAV
HGWGGLVFHD VTTVRHAEKA LEAGVDGLIL VCAGAGGHAG TLSPFALVGE VRRFYDGPLV
LSGAITTGSA ILAAQAMGAD LAYMGTRFIA TAEANAAPAY KDMIVATRAA DVVYTPFFTG
VSGNYLKPSV VAAGLDPDAL PDSDKSRMDF GSGRTKAWRD IWGAGQGVGT IDDVLPAAEV
IARLKREYAA AREALLSRAG NPCREILPTN PAE