Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_6027 |
Symbol | |
ID | 7305387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 6129089 |
End bp | 6130882 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643603650 |
Product | poly(R)-hydroxyalkanoic acid synthase, class I |
Protein accession | YP_002501157 |
Protein GI | 220925855 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.436418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGGTCG AGAAGATCGC GACGCCTGTC GTGGATGTGG AGTCGATGTC CCGCAATGCG GGGCAGCTGG TCGAGGAATT CGGGCGGGCG GTCGCCGCCT ACGCCAAACC CTTCGAGCCG GGCAAGACCG ATCCGTCCAT GGCCGAGGGC GTCGCGGAGA TGGTCAGGAC GCTCGGCACG GTGGCCGAGC GCTGGCTCGC CGATCCCCAG AAGGCGGCGG AGGCCCAGAC GCTGATCGGC GGCCAGTTCC TGGCCCTGTG GGGCTCGACC CTGCAGCGGA TGCAGGGCGA GGCGGCGTCC CCGGTCGTCA TGCCCGACCC GCGCGACAAG CGCTTCGCGG CCCCGGAATG GTCGACGAAC CCGATGTTCG ACTTCCTCAA GCAGGGCTAT CTCATCACCA GCCGCTGGGC CGAGATCCTG GTGGACGAGG CCGAGGGGCT CGACGACCAC ACCCGCGCCA AGGCCCGCTT CTACGTCAGG CAGCTGTCGA GCGCCCTGTC GCCCTCGAAC TTCGTGATGA CGAACCCGGA GCTGATCCGA GATACCCTGC GGGAGAACGG CGCGAACCTC GTGCGCGGCA TGAAGATGCT GGCCGAGGAT GTCGAGGCCG GCCGCGGGGA GCTGCGCCTG CGCCAGACCG ATCCGGGCCG CTTCGAGATC GGCGTCAACA TGGCGAGCAC GCCGGGCGAG GTCGTCTTCC GCAACGACCT CATCGAGCTG ATCCAGTACG CGCCCCAGAC CGAGACGGTA CTCAGGCGCC CGCTCCTGAT CGTGCCGCCC TGGATCAACA AGTTCTACAT CCTCGACCTC AACAAGGAGA AGAGCTTCAT CGGCTGGGCG GTGTCGCAGG GTCTCACGGT CTTCGTGATC TCCTGGGTCA ACCCGGACGA GCGGCACGCG GCCAAGGATT TCGAGAGCTA CATGCGCGAG GGCATCTTCG CGGCTCTCGA CGCGATCGAG GCGGCGACGG GCGAGCGGAC GGTCACGGCG GCCGGCTACT GCGTGGGCGG CACGCTGCTC GGCGTGACGC TCGCCTACAT GGCGGCGACC GGCGACGATC GCATCGACAG CGCCACCTTC CTGACCACCC AGGTCGACTT CACCCATGCC GGCGACCTCA AGGTCTTCGT CGACGAGCCG CAGATCCAGG CGGTCGAGGC CAGCATGCAG AGCCGCGGCT ATCTCGACGG CTCGAAGATG GCGACCGCCT TCAACATGCT GCGGCCCAAC GACCTGATCT GGCCCTACGT CGTGAACAAC TACCTGAAGG GCAAGGCGCC GCTGCCCTTC GACTTGCTCT ACTGGAACTC CGACGCGACC CGGATGCCGG CCGCGAACCA CTCGTTCTAC CTGCGCAACT GCTATCTGGA GAACAGGCTC TCGCGAGGCG AGATGATTCT GGGCGGCGTC CGGCTCGATC TCGGCAAGGT GACGATCCCG ATCTTCAACC TCGCCACCCG CGAGGACCAC ATCGCTCCCG CCCTCTCGGT CTTCGAGGGC TGCCGCAGCT TCGGCGGGCC GGTCGACTAT GTGCTGGCCG GTTCCGGCCA CATCGCGGGC GTGGTCAACC CGCCGACCAA GCCCAAGTAC CAGTTCTGGA CCGGCGGCCC GGCCCACGGC GCCTTCGGCG ACTGGCTCTC CGCCGCCGTC GAGCATCCGG GCTCCTGGTG GCCCTACTGG TTCTCCTGGA TCGAGGGCCA GGCCCCCGAG CGGGTCCCGG CCCGCGAGCC CGGCGGCGGC AAGCTCCCCT CGCTCGCCCC CGCCCCCGGC ACCTATGTGC GCGTGCGGGC TTGA
|
Protein sequence | MTVEKIATPV VDVESMSRNA GQLVEEFGRA VAAYAKPFEP GKTDPSMAEG VAEMVRTLGT VAERWLADPQ KAAEAQTLIG GQFLALWGST LQRMQGEAAS PVVMPDPRDK RFAAPEWSTN PMFDFLKQGY LITSRWAEIL VDEAEGLDDH TRAKARFYVR QLSSALSPSN FVMTNPELIR DTLRENGANL VRGMKMLAED VEAGRGELRL RQTDPGRFEI GVNMASTPGE VVFRNDLIEL IQYAPQTETV LRRPLLIVPP WINKFYILDL NKEKSFIGWA VSQGLTVFVI SWVNPDERHA AKDFESYMRE GIFAALDAIE AATGERTVTA AGYCVGGTLL GVTLAYMAAT GDDRIDSATF LTTQVDFTHA GDLKVFVDEP QIQAVEASMQ SRGYLDGSKM ATAFNMLRPN DLIWPYVVNN YLKGKAPLPF DLLYWNSDAT RMPAANHSFY LRNCYLENRL SRGEMILGGV RLDLGKVTIP IFNLATREDH IAPALSVFEG CRSFGGPVDY VLAGSGHIAG VVNPPTKPKY QFWTGGPAHG AFGDWLSAAV EHPGSWWPYW FSWIEGQAPE RVPAREPGGG KLPSLAPAPG TYVRVRA
|
| |