Gene Mnod_5979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5979 
Symbol 
ID7305339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6085122 
End bp6085988 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID643603602 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002501109 
Protein GI220925807 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.077375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGGC CCTTCCAGCT TGCTTCCCGC CGGCTCAGCG CCGGCCTCGC GGTCCTGCTG 
CTGGCGGCAG GACCGGGGGC GGCGCTCGCG CAGCAGCTGC CGGACCTCGT CACGACCGAC
GCGCTGCGCG TCTGCGGCGA CCCGGGCAAC ATGCCTTTCT CCGACCGCAA GGGGGAGGGG
TTCGAGAACA GAATCGCGGC GATCGTCGCC GACGAGCTGA AGGTGAAGCT GCGCACCTAT
TGGCTGACGC AGGGTCCCGG CTTCGTGCGC AACACGCTGG GCGCCGGCCT ATGCGACGTG
ATCATCGGCT CGGCCCTGGG GACGGATCTC GTCCAGAACA CCAACCCCTA TTACCGCTCG
GCTTACGTGC TGGTGTCGCG CCAGGGCGAC CTCTCCGGGG TGACCGCCCT CGACGATCCC
CGGCTCAAGG GGAAGACGAT CGGCGTCGTG GCCGGCACAC CCCCGGTCAA CCGGATGGGG
GATGTGGGGC TCGTCGGGTC CATGCGGGCC TATGCGCCCT ACCAGTTCGA CCCGGCGAAT
CAGCATCAGA CCGTGTCGGC GCAGATCGTG GCCGACCTCG CCGAGAGGAA GCTCGATGCG
GCGATCCTGT GGGGTCCGGC GGCGGGCTGG CTCGCCCGGC AGAGCGGGGT GCCGATGGAG
GTGGTGCCGC TCCTGAAGGA GCCCGACCGC CCGGCCCTGA CCTACCGCAT CGCCATGGGA
GTGCGGATCA ACGAGAACGA GTGGAAGCGC ACGCTCAACA CGGTCCTGCG CAAGCGCCGG
GCAGAGATCG AGCAGGTGCT GCGCGACTAT GCGGTGCCGC TTCTCGACGA GGAGCAGAAC
CGGCTCCTGG ACGACACCAA GCCGTGA
 
Protein sequence
MPRPFQLASR RLSAGLAVLL LAAGPGAALA QQLPDLVTTD ALRVCGDPGN MPFSDRKGEG 
FENRIAAIVA DELKVKLRTY WLTQGPGFVR NTLGAGLCDV IIGSALGTDL VQNTNPYYRS
AYVLVSRQGD LSGVTALDDP RLKGKTIGVV AGTPPVNRMG DVGLVGSMRA YAPYQFDPAN
QHQTVSAQIV ADLAERKLDA AILWGPAAGW LARQSGVPME VVPLLKEPDR PALTYRIAMG
VRINENEWKR TLNTVLRKRR AEIEQVLRDY AVPLLDEEQN RLLDDTKP