Gene Mnod_5945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5945 
Symbol 
ID7306127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp6055274 
End bp6055861 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID643603568 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002501075 
Protein GI220925773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0274895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGC TGCGCGTCCT CGACCGCCTG GAGGAGGTCC TGATCGCGAG CCTGATGGCC 
GCGGCAACGC TCCTGATCTT CGTCGCCGTC GTCCACCGCT ACGCCTCGGG GATCGATCTC 
CTCTTCCCCA TCACCTCGGC GATCCACCTG TCCTGGGCGC AGGAGCTCTG CATCTACATG 
TTCGTGTGGA TGGCGAAGTT CGGGGCGGCC TATGGCGTGC GCACCGGCAT CCATGTCGGG 
GTCGATGTGC TGGTCAACCG GCTCGACCCG GCGATCCGCA ACAAGGTCAT CCTGTTCGGC 
CTGCTCTGCG GGGCGCTGTT CACGGCGATC ATCGGCACGA TGGGCGCGAA GTTCGTGCTC 
GGCCTCGTCG ACACCGACCA GACTTCGCCG GACCTCGAGA TCCCGAGCTG GATCGTCTAC 
CTCGCCATCC CGCTCGGCTC CTACCTGATG TGCTTCCGCT TCCTCCAGGT CGCCTGGAGC 
TTCGCGCACA CGGGCGAACT GCCCCACCAC GATCCCGGCC ACGTGGAGGG CGTGGTCGAG 
AGCCCGCAGG CCGCCCGCGA CCTCGCGGCC GAGGAGCGCG CGCGATGA
 
Protein sequence
MILLRVLDRL EEVLIASLMA AATLLIFVAV VHRYASGIDL LFPITSAIHL SWAQELCIYM 
FVWMAKFGAA YGVRTGIHVG VDVLVNRLDP AIRNKVILFG LLCGALFTAI IGTMGAKFVL 
GLVDTDQTSP DLEIPSWIVY LAIPLGSYLM CFRFLQVAWS FAHTGELPHH DPGHVEGVVE 
SPQAARDLAA EERAR