Gene Mnod_5928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5928 
Symbol 
ID7306110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6042685 
End bp6043476 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content71% 
IMG OID643603552 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002501059 
Protein GI220925757 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.341199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCGG TCCGGGAGGA CATGCGGGAG CCCCCCGCCC CGTCGGCGAG CCAGATGCGG 
AAACCCATGA CGCAGCAGGA CCGAGCTCAC GACCAGCCGA CCGATCCTCG CCCCGGCCTG
TCGGCCAGCA TCCGCAGCCA TCTCGGCAGC CAGTTGCGCG CCGCCTACGA GGCGCTCGGC
GCCGAGGATC CGAGCGGCCG CTTCGCCGAG CTGATCGCGC GGCTCGAAGC GGCGCTGGCG
GCGCAAGGAG AGGTGGTGCG GCCCGAGTTC CGCGACGGCT TGCTGCAGGC GGTGCCTTCC
TTACGCGCCT TCGCCCTCTC GCTCACCAGC AACACCGCCC GGGCCGACGA CCTCGTGCAG
GACACCTTGC TCAAGGGCTG GCAGCACCGG GCGCGGTTCC AGCCCGGCAC CAACCTGAAT
GCGTGGCTGT TCACCATCCT GCGCAACATC TTCTACTCGG ATCACCGCAA GCGGGTGCGC
GAGGTCGAGG ACCAGGACGG CTCCTATGCG GCCCGCCTCG CCACCGCCCC GCACCAGGGC
GACCGGCTCG ACGTGGAGGA TCTCCAGAGC GCCCTCGCCA AGCTGCCGCC GGACCAGCGC
GAGGCGCTGG TGCTGGTGGG GGCCGAGGGC GTCTCCTACG AGGAGGCGGC GACGATCATG
AACTGCAAGG TCGGCACGGT GAAGAGCCGC GTCAGCCGCG CCCGCAACCG CCTGGCCGAG
CTCCTGGGCT ACGACGAGGA GGATCTCGGC ACCGACCGGC TGATCCAGTC GGCCATGCCG
AAGGACGGCT GA
 
Protein sequence
MIPVREDMRE PPAPSASQMR KPMTQQDRAH DQPTDPRPGL SASIRSHLGS QLRAAYEALG 
AEDPSGRFAE LIARLEAALA AQGEVVRPEF RDGLLQAVPS LRAFALSLTS NTARADDLVQ
DTLLKGWQHR ARFQPGTNLN AWLFTILRNI FYSDHRKRVR EVEDQDGSYA ARLATAPHQG
DRLDVEDLQS ALAKLPPDQR EALVLVGAEG VSYEEAATIM NCKVGTVKSR VSRARNRLAE
LLGYDEEDLG TDRLIQSAMP KDG