Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_5928 |
Symbol | |
ID | 7306110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 6042685 |
End bp | 6043476 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643603552 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002501059 |
Protein GI | 220925757 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.341199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCCGG TCCGGGAGGA CATGCGGGAG CCCCCCGCCC CGTCGGCGAG CCAGATGCGG AAACCCATGA CGCAGCAGGA CCGAGCTCAC GACCAGCCGA CCGATCCTCG CCCCGGCCTG TCGGCCAGCA TCCGCAGCCA TCTCGGCAGC CAGTTGCGCG CCGCCTACGA GGCGCTCGGC GCCGAGGATC CGAGCGGCCG CTTCGCCGAG CTGATCGCGC GGCTCGAAGC GGCGCTGGCG GCGCAAGGAG AGGTGGTGCG GCCCGAGTTC CGCGACGGCT TGCTGCAGGC GGTGCCTTCC TTACGCGCCT TCGCCCTCTC GCTCACCAGC AACACCGCCC GGGCCGACGA CCTCGTGCAG GACACCTTGC TCAAGGGCTG GCAGCACCGG GCGCGGTTCC AGCCCGGCAC CAACCTGAAT GCGTGGCTGT TCACCATCCT GCGCAACATC TTCTACTCGG ATCACCGCAA GCGGGTGCGC GAGGTCGAGG ACCAGGACGG CTCCTATGCG GCCCGCCTCG CCACCGCCCC GCACCAGGGC GACCGGCTCG ACGTGGAGGA TCTCCAGAGC GCCCTCGCCA AGCTGCCGCC GGACCAGCGC GAGGCGCTGG TGCTGGTGGG GGCCGAGGGC GTCTCCTACG AGGAGGCGGC GACGATCATG AACTGCAAGG TCGGCACGGT GAAGAGCCGC GTCAGCCGCG CCCGCAACCG CCTGGCCGAG CTCCTGGGCT ACGACGAGGA GGATCTCGGC ACCGACCGGC TGATCCAGTC GGCCATGCCG AAGGACGGCT GA
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Protein sequence | MIPVREDMRE PPAPSASQMR KPMTQQDRAH DQPTDPRPGL SASIRSHLGS QLRAAYEALG AEDPSGRFAE LIARLEAALA AQGEVVRPEF RDGLLQAVPS LRAFALSLTS NTARADDLVQ DTLLKGWQHR ARFQPGTNLN AWLFTILRNI FYSDHRKRVR EVEDQDGSYA ARLATAPHQG DRLDVEDLQS ALAKLPPDQR EALVLVGAEG VSYEEAATIM NCKVGTVKSR VSRARNRLAE LLGYDEEDLG TDRLIQSAMP KDG
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