Gene Mnod_5873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5873 
Symbol 
ID7301135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5979498 
End bp5980715 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID643603491 
Productplasmid partitioning protein RepA 
Protein accessionYP_002501004 
Protein GI220925702 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR03453] plasmid partitioning protein RepA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.128849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAA CACCGCAGGA TTCGCTGCGC GCCGCAGGCG CGCCCCGTCC CTCGATCACG 
AGCCTCATCG CCGCCGATGG CGGCGCGCTC TCGGCGGAGC TGAACGCGCT GCGCCGCACG
CTGTTTCCAC CCGCCTCCAC CAAGGTCCTG CGCTCCTTCA CCTCGGGTGA GGCGGCCCGG
CTGATCGGGG TGGCGGATGG CTACCTGCGC CAGATCTCCC TGGCCGGCAA AGGACCGGAG
CCGGAGGTGG GCCCGGGCGG GCGGCGCTCC TATACCCTCG ACCAGATCAA CGCGCTGCGC
CATCTCCTCG ACGAAGGGCC GAAGAGCAAG CGCTACGTGC CGCATCGCAG CGGGTCCGAG
CATTGCCAGG TGCTGGCGGT CGTCAACTTC AAGGGCGGCT CGGGCAAGAC CACCACGGCG
GCCCACCTCG CCCAGTATCT CGCGCTCAAG GGCTACCGGG TGCTCGCCGT CGACCTCGAC
CCCCAGGCCT CGCTGACCGC GCTCCACGGC TACCAGCCGG AATTCGACGT GGATGCCAAC
CAGACCCTCT ACGCAGCCAT CCGGTACGAC GAGGCCCGGC GGCCCCTCGC GGAGGTCGTG
CGCCGCACCT ACTTCTCGGG CCTCGACCTC GTGCCGGCGA ATCTCGAACT CATGGAGTTC
GAGCACGACA CGCCGAAGGC CCTGGCCGAC CAGGAGGCCG AGCTGTTCTT CGGCCGCATC
GCCACGGTTC TGGGCAGCGT GGCGGAGGCC TACGACGTCA TGATCCTCGA CTGCCCGCCC
CAGCTCGGCT TCCTCACGCT CGGGGCGCTC TGCGCGGCGA CGGCGATGCT GGTCACCGTG
CATCCGCAGA TGCTCGACGT CATGTCGATG TGCCAGTTCC TGCTGATGGC CTCGGACCTG
CTCGGCGTGG TGCAGGAAGC CGGGGCTGAG CTCGACTACG ATTTCCTGCG CTACGTGGTG
ACGCGCTATG AGCCCTCCGA CGGCCCCCAG ACCCAGATGG TCGCCTTCAT GCGCTCCCTG
TTCCGCGACC GCGTCCTGAC CCACACGATG CTCAAATCCA CCGCCGTCTC GGATGCCGGC
CTGTCGAAGC AGACGCTCTA CGAGATCGGC CGCGAAAGCT TCTCCCGTGC AACCTACGAC
CGCGCCATCG AGGCGCTCGA CGGAGTCAAC GGCGAGATCC TGGGCCTGAT GCACCGTGCC
TGGGGACGCG CCGCATGA
 
Protein sequence
MAETPQDSLR AAGAPRPSIT SLIAADGGAL SAELNALRRT LFPPASTKVL RSFTSGEAAR 
LIGVADGYLR QISLAGKGPE PEVGPGGRRS YTLDQINALR HLLDEGPKSK RYVPHRSGSE
HCQVLAVVNF KGGSGKTTTA AHLAQYLALK GYRVLAVDLD PQASLTALHG YQPEFDVDAN
QTLYAAIRYD EARRPLAEVV RRTYFSGLDL VPANLELMEF EHDTPKALAD QEAELFFGRI
ATVLGSVAEA YDVMILDCPP QLGFLTLGAL CAATAMLVTV HPQMLDVMSM CQFLLMASDL
LGVVQEAGAE LDYDFLRYVV TRYEPSDGPQ TQMVAFMRSL FRDRVLTHTM LKSTAVSDAG
LSKQTLYEIG RESFSRATYD RAIEALDGVN GEILGLMHRA WGRAA