Gene Mnod_5862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5862 
Symbol 
ID7301124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5969511 
End bp5970215 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID643603480 
ProductHly-III family protein 
Protein accessionYP_002500993 
Protein GI220925691 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACGA CGACCGGACA CGCCGACGCT CCCGCCGACG ACGGCCGGCC GCCCTCCCTG 
CACTGGGCCT ACACGCCCCG CGAGCTTCTG GCGGACGGGA TCGTGCACGT CCTCGGGGTC
GCCCTTGCGG TGATCGGGGC GCTCGCCCTC GTCGTCACCG CGCTCCTCAT TCGGCTCGAC
GCCTCCGGGC GGGTGTCGGT GGGGATCTAC GCGACGGGCC TCGTGGCGAT GCTGAGCGTC
TCGGCCGTCT ACAACATGTG GCCGGTCGGC CGGCTCAAGT GGCTCCTGCG CCGCGCCGAC
CACGCCACGA TCTTCCTGAT GATCGCCGGC ACCTACACGC CGCTCGTCAC CCTGGTCGGC
GCTGGCGGCC TCGCCTGGGG CCTGCTCGCA GGAATCTGGC TCTTCGCGGT GGCGGGGGTG
GCGATCAAGC TCGCGCTGCC CGGCCGCTTC GACCGGCTCG CGGTCGGCCT CTACCTCGCG
CTCGGCTGGA GCGGGGTGAC GGCCTACGAT TCGGTGATCG GGCTGCTCGC GCCTGAGGCG
CTTGCGCTGC TCGCCGCTGG CGGCCTGCTC TACTCGGCGG GCGTGGTCTT CCATCTCTGG
CAGCGGCTGC CGTTCCAGAA CGCCATCTGG CACGGTTTCG TGCTGGCCGC CGCCGCCTGT
CACTACGGCG CGGTGTTCCA CAGCATGATC GAGGCGGCAG CGTGA
 
Protein sequence
MRTTTGHADA PADDGRPPSL HWAYTPRELL ADGIVHVLGV ALAVIGALAL VVTALLIRLD 
ASGRVSVGIY ATGLVAMLSV SAVYNMWPVG RLKWLLRRAD HATIFLMIAG TYTPLVTLVG
AGGLAWGLLA GIWLFAVAGV AIKLALPGRF DRLAVGLYLA LGWSGVTAYD SVIGLLAPEA
LALLAAGGLL YSAGVVFHLW QRLPFQNAIW HGFVLAAAAC HYGAVFHSMI EAAA