| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5854 |
|---|
| Symbol | |
|---|
| ID | 7301116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 5958902 |
|---|
| End bp | 5961328 |
|---|
| Gene Length | 2427 bp |
|---|
| Protein Length | 808 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643603472 |
|---|
| Product | DNA gyrase, B subunit |
|---|
| Protein accession | YP_002500985 |
|---|
| Protein GI | 220925683 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAC CCGCCCGCGA CCTCACCACC GACACCTACA GCGCCGACTC GATCAAGGTC
CTCAAGGGCC TCGATGCGGT GCGCAAGCGT CCGGGGATGT ATATCGGCGA CACCGACGAC
GGCTCGGGCC TGCACCACAT GGTCTACGAG GTCGTCGACA ACGCCATCGA CGAGGCGCTG
GCGGGCCACG CCACCCTCGT CACCGTGACC CTCAACCCGG ACGGCTCCTG CACCGTCTCG
GATAACGGCC GCGGCATCCC GACCGACATC CACGCGGAGG AGGGCGTCTC GGCCGCCGAG
GTCATCATGA CCCAGCTCCA TGCCGGGGGT AAGTTCGACC AGAACTCCTA CAAGGTGTCG
GGCGGGCTCC ACGGCGTCGG CGTCTCGGTG GTGAACGCGC TCTCGACCTG GCTGCGCCTG
CGCATCTGGC GCGGCGGCCA CGAGCACGCG ATGGAGTTCC GCCACGGCGA CGCGGTGGCG
CCCCTCGCCG TCGTCGGACC GGCGGGCGAG AAGCGCGGCA CGGAGGTCAC CTTCCTGCCG
AGCCCTGAGA CCTTCTCGAT GGTGGAGTTC GACTACGCCA CCCTCGAGAA GCGCCTGCGC
GAGCTCGCCT TCCTGAATTC GGGGGTGCGG ATCGTCCTCA CCGATGCCCG TCACGCCGAG
CACAAGCGCG AGGAGCTGGT CTACGAGGGC GGCGTCGAGG CCTTCGTGCG CTATCTCGAC
CGCACCAAGA CGCCGCTCGT CGCCAAGCCC GTGGTGGTGC GCGCCGAGCG CGACGGGATC
GGCGTCGAAG TCGCCCTGTG GTGGAACGAC AGCTATCACG AGACGGTGCT GCCCTTCACC
AACAACATCC CGCAGCGGGA CGGCGGCACG CATATGGCGG GCTTCCGGGC GGCGCTCACG
CGCCAGATCA CCGGCTATGC GGAATCCTCC GGCATCGCCA AGAAGGAGAA GGTCACGCTC
TCGGGCGACG ATTGCCGCGA GGGTCTGACC GCCATCATCT CGGTGAAGGT CCCGGACCCC
AAATTCTCCT CGCAGACCAA GGACAAGCTG GTCTCGTCGG AGGTCCGGCC GGTGGTCGAG
AACGTGCTCA ACGAGGGCCT GTCGAACTGG CTCGAGGAGC ATCCGAGCGA GGCCAAGACC
ATCGTGGGCA AGGTGGCGGA GGCGGCAGCC GCCCGCGAGG CCGCCCGCAA GGCCCGCGAG
CTCACCCGAC GGAAAGGAGC CCTCGACATC GCCTCGCTGC CCGGCAAGCT CGCCGACTGC
CAGGAGCGCG ACCCGTCGAA ATGCGAGATC CTGCTGGTGG AGGGCGATTC GGCCGGCGGG
TCGGCCAAGC AGGGCCGCGA CCGCACCTTC CAGGCGGTGC TGCCGCTGCG CGGCAAGATC
CTGAACGTGG AGCGCGCCCG GTTCGACAAG ATGCTGTCGA GCCAGGAGAT CGGCACGCTC
ATCACGGCGC TCGGCACCGG CATCGGCCGC GAGGAGTTCA ACCCCGACAA GCTGCGCTAT
CACCGCATCA TCATCATGAC GGATGCGGAC GTGGACGGCT CGCACATCCG CACGCTGCTG
CTCACCTTCT TCTTCCGGCA GATGCCCGAG CTGATCGAGC GCGGTCACCT CTACATCGCG
CAGCCGCCGC TCTACAAAGC TTCGAAGGGC CGCTCGGCCA TCTACCTCAA GGACGAGCGG
GCGCTGGAGG ATTACCTGAT CGATGGCGGG ATCGAGGGGG CCTCCTTACG CCTCGCGACC
GGCGTCGCGT TCGGGGGCGC GCAGCTCAAG GCGCTGGTCG ACGAGGCCCG CAGCGTGCGC
CACATCCTGC ACGGGCTCCA CACCCGCTAC GACCGGACGG TGGTGGAGCA GGCAGCGATC
GCCGGAGCGC TGCGCCCGGC CGTCGCCGAG GATCCGAGCC ACGCCGAGGT GGTGGCCGAC
GAGATCGCGA AGCGCCTCAA TGCCATCGCG GACGAGATCG AGCGCGGCTG GGAGGGCGAG
GCGAAGGATG GCGGCTACGT CCTGTCGCGC ACCTTGCGCG GCGTGCGTCA GGTGGCGGTG
CTCGACGAGG CGCTGATCTC CTCGCAGGAG GCGCGCCGGC TCGACGAGCG CACGGATGCG
CTGCGCCAGA TCTACGACGC CCCGGCGACG CTCCAGCGCA AGGGCGAGGA AATCGTCCTG
CACGGTCCCG TCGCGCTCTT CGAGACCATG ATGGCGCTCG GGCGCAAGGG CCTGCAGCTC
CAGCGCTACA AGGGGCTCGG CGAGATGACC GCCCAGCAGC TCTGGGAGAC CACCCTCGAC
CGCGACGTGC GCTCGCTGCT GCAGGTCAAG GTCAAGGACA CGACCGATGC CGACGACCTC
TTCGTCAAGC TGATGGGCGA CGTGGTGGAG CCACGGCGGG AGTTCATCCA GGAGAACGCG
CTCAACGTGG CGAACCTGGA CGTCTGA
|
|---|
| Protein sequence | MAEPARDLTT DTYSADSIKV LKGLDAVRKR PGMYIGDTDD GSGLHHMVYE VVDNAIDEAL
AGHATLVTVT LNPDGSCTVS DNGRGIPTDI HAEEGVSAAE VIMTQLHAGG KFDQNSYKVS
GGLHGVGVSV VNALSTWLRL RIWRGGHEHA MEFRHGDAVA PLAVVGPAGE KRGTEVTFLP
SPETFSMVEF DYATLEKRLR ELAFLNSGVR IVLTDARHAE HKREELVYEG GVEAFVRYLD
RTKTPLVAKP VVVRAERDGI GVEVALWWND SYHETVLPFT NNIPQRDGGT HMAGFRAALT
RQITGYAESS GIAKKEKVTL SGDDCREGLT AIISVKVPDP KFSSQTKDKL VSSEVRPVVE
NVLNEGLSNW LEEHPSEAKT IVGKVAEAAA AREAARKARE LTRRKGALDI ASLPGKLADC
QERDPSKCEI LLVEGDSAGG SAKQGRDRTF QAVLPLRGKI LNVERARFDK MLSSQEIGTL
ITALGTGIGR EEFNPDKLRY HRIIIMTDAD VDGSHIRTLL LTFFFRQMPE LIERGHLYIA
QPPLYKASKG RSAIYLKDER ALEDYLIDGG IEGASLRLAT GVAFGGAQLK ALVDEARSVR
HILHGLHTRY DRTVVEQAAI AGALRPAVAE DPSHAEVVAD EIAKRLNAIA DEIERGWEGE
AKDGGYVLSR TLRGVRQVAV LDEALISSQE ARRLDERTDA LRQIYDAPAT LQRKGEEIVL
HGPVALFETM MALGRKGLQL QRYKGLGEMT AQQLWETTLD RDVRSLLQVK VKDTTDADDL
FVKLMGDVVE PRREFIQENA LNVANLDV
|
|---|
| |