| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5846 |
|---|
| Symbol | |
|---|
| ID | 7301108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 5946552 |
|---|
| End bp | 5947871 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643603464 |
|---|
| Product | FeS assembly protein SufD |
|---|
| Protein accession | YP_002500977 |
|---|
| Protein GI | 220925675 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00798373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA TCACCACCCT GCGCACGCCG GCCGAGACTG GCCTGTCGAA GCTGTTCGAG
GTCCGGCGCC TCAAGCTGCC GGGCTCGGCC ATCGCCCGCG AGGAGGCCTT CCGCTTCTTC
GAGGCGACGG GCCTGCCCCA TCGCCGGGTC GAGGCCTTCA AGTATTCCGA CCTGCGCGCG
GCACTCCGCG AGGCCGCGCC GCCCGCCGAG GCGCCGACCC CGGAGGCCGC CCGCAACGCC
GTGATGAAGG CCGAGGGCTT CGCCACCATC GAGGCGGCGC GGCTCACCTT CGTCAACGGC
CACCTCGTCC CGGCCCTGTC GGATCTCGGC GCCATGCCGG AGGGCGTCGA GGTGACGCCC
CTCGTCGAGG CGCTGACGAA CGGCCACCCG CTGACGGAGC AATTCACGCC CGTCGCCCAG
GCGCGCGAGA ACCCGATCTT CCAGCTCAAC ATCGCCTTCA TGGCGGACGG CGCGCTGATC
CGGGTCGCGG CCGGCGCCAA GGTCGAGCGG CCGCTGCATC TGCGCTTCGT CGGCACGGGC
GCGGAGGCCT TCTCCACCGC CACCCGCATT CTCGTGGTGC TGGAGGAGGG GGCGGAGCTC
ACCCTGTTCG AGAGCCACGA GGGGCCGGAC GGCGTCGCCT ACCAGCCCAA CGACGCCCTC
GACGCGGTGA TCGCGGACGG TGCTACCTTG CGCCACACGA GGCTCAACCG CGAGGGGCGC
GAGGCGATCG CCCTCTCGAC CCTCTCGGTA AAGCTCGGGG CGAAGGCCCA TCTGGAGACC
GTGAATGTCG TGGCCGGCGC GGCCTTCTCG CGCCACCAGC TCTACCTGCT CTTTGCGGGC
GAGGACGCCA CCGCGACCGT CAACGGCGCC ACCATGCTGG GCAACGGACA GCTCGGCGAC
TCGACGCTGC TTGCCGACCA CGCTGCCACC GGGGGCTTCA GCCGCGAGCA GTTCAAGACG
GTGATCGACG GCGAGGCCAC CGGCGTCTTC CAGGGCAAGA TCATCGTCGA GCAGGCCGCG
CAGAAGACCG ACGGCAAGAT GAAGTCCGAC TGCCTCCTCC TCTCCGACGA GGGGCAGATG
ATGAACAAGC CGGAGCTGGA GATCTTCGCC GACGACGTGG CCTGCGGCCA CGGCGCCACT
TGCGGCGCGC TCGACGACGA CCTTCTCTTC TACCTCATGG CTCGCGGCCT GCCGCGGGGC
GAGGCGGAGG GCCTTCTCGT CCAGGCCTTC CTGGGCGAGG CCATCGAGGC GATCAGCCAC
GAGGGCGCCC GCGAGGCGAT GATCGCCGTC GTGGAGAACT GGCTCGCCGC CCGCCGGTGA
|
|---|
| Protein sequence | MADITTLRTP AETGLSKLFE VRRLKLPGSA IAREEAFRFF EATGLPHRRV EAFKYSDLRA
ALREAAPPAE APTPEAARNA VMKAEGFATI EAARLTFVNG HLVPALSDLG AMPEGVEVTP
LVEALTNGHP LTEQFTPVAQ ARENPIFQLN IAFMADGALI RVAAGAKVER PLHLRFVGTG
AEAFSTATRI LVVLEEGAEL TLFESHEGPD GVAYQPNDAL DAVIADGATL RHTRLNREGR
EAIALSTLSV KLGAKAHLET VNVVAGAAFS RHQLYLLFAG EDATATVNGA TMLGNGQLGD
STLLADHAAT GGFSREQFKT VIDGEATGVF QGKIIVEQAA QKTDGKMKSD CLLLSDEGQM
MNKPELEIFA DDVACGHGAT CGALDDDLLF YLMARGLPRG EAEGLLVQAF LGEAIEAISH
EGAREAMIAV VENWLAARR
|
|---|
| |