Gene Mnod_5833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5833 
Symbol 
ID7303250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5930108 
End bp5931817 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content70% 
IMG OID643603451 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002500964 
Protein GI220925662 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGACC CAGTGCGCGT CACGTCGGCC CACTATCCGG AGCGGCCCTG GCTGAAGGCT 
TACCCGAGCG ACGTCCCCGC CGAGATCGAT GTCGACGGCC TCGGCACCCT CGCCGACCTC
TTCGCCACGG CGACCGCGCG CTACGCCGAT CGCCCGGCGA TCCGCTGCTT CGGGGCGACG
CTGAGCTTCG CCCAGCTCAA GGCGGGGGCC GAGGCTTTCG CCGGCTGGTT GCAGGCGCAG
GGCATCCGCA AGGGCGACCG GGTCGCCCTG ATGCTGCCGA ACGTGCCCAC CTATCCGATC
GCGCTGTTCG GGACGCTGAT CGCGGGCGCG ACCGCCGTCA ACGTCAACCC GCTCTACACG
GCCCGCGAAC TCACCCATCA GGTCGGCGAT GCCGGCGCGC GGATGCTCGT CGTGCTGGAG
AATTTCGCGG GCGTCGTCGC CCAGGCGCTG CCCGCGCTTC CCGAACTGGA GATGGTGGTG
GTGGCGGGCG CGGGCGACGG CCTGCGGCTT CGCGGCGTGC TGATCACGCT GGCCGCCCGC
TACCTCAAGA AGGCGGTGCC GCCCTACAGC CTGCCGCCCG GGCGCGGCAC GAGGTTCCTG
GCGGTGCTCG CGGCGGGCCG CAAGGCGGGC TTCCGGCCGC TGCCGATCGC GCCCGGCGAC
CTCGCCTTCC TGCAATATAC CGGCGGCACC ACCGGCGTCT CGAAGGGCGC GATGCTCACC
CATCGCAACG TGATGGCCAA TATCGAGCAG ACCCGCGTCT GGTTCGGCAT GCGCGACGAC
GAGGGGCCGG GCCGGGTGAT GGTCACGGCG CTGCCGCTCT ACCACATCTA CGGCCTCACC
TGCTGTTTCT TCTTCATGGT GCGGCTGGGG GCCTGCTGCC TGTTCGTGCC CAATCCGCGC
GACATCGCCG GATTCGTGAA GCTGCTGCGG ACGAACCGGT TCACCGACCT GTCGGGCGTC
AACACGCTGT TCAACGCGCT GCTCAACCAC CCGGATATCG GCAAGGTCGA CTGGTCCGCG
CTCGAATACG TCAATGCCGG CGGCATGGCG GTTCAGGCGG TGGTGGCGCG GCGCTGGAAG
GCGCTCACCG GCAAGCCGAT CATCGAGGGC TACGGCCTGT CGGAGACGGC GCCCGTGGTG
TCCATCAATC CGCGCACCCT CACCGAATGG TCGGGCACCA TCGGCTACCC GGTTCCCTCG
ACCGAGATCT CGGTGCGCGA CGCGGCCGGC GCGGAGGTGC CGATCGGGGA GGCGGGCGAG
CTCTGCGTGC GCGGGCCGCA GGTGATGCCG GGCTACTGGC GCCGGCCCGA GGAGACCGCG
AAGGCCATGA CGCCCGACGG ATTCTTCCGC ACCGGCGACA TCGCGGTGCT GCAGCCGGAC
GGGCAGCTGC GGCTCGTGGA CCGGATGAAG GACATGATCC TGGTCTCCGG CTTCAACGTC
TATCCGAACG AGGTCGAGGA CGTGCTCGCC ACGCATCCGG GCGTGCTGGA GGTCGCGGTG
GTGGGCCGGC CGATGCCGGA GACCGGGGAG AGCGTGGTCG CCCACGTGGT GCGCCGCGAC
CCCGACCTCA CCGCCGAGGC CCTGCGCGCT TTCGCCCGCA AGAACCTCAC CTCCTACAAG
GTCCCGCGCG AGATCGTCTT CCACGGCGCC CTGCCGAAGA GCAATGTCGG CAAGGTGCTG
CGGCGGGAAT TGCGGGACGG AGGCGCTTGA
 
Protein sequence
MGDPVRVTSA HYPERPWLKA YPSDVPAEID VDGLGTLADL FATATARYAD RPAIRCFGAT 
LSFAQLKAGA EAFAGWLQAQ GIRKGDRVAL MLPNVPTYPI ALFGTLIAGA TAVNVNPLYT
ARELTHQVGD AGARMLVVLE NFAGVVAQAL PALPELEMVV VAGAGDGLRL RGVLITLAAR
YLKKAVPPYS LPPGRGTRFL AVLAAGRKAG FRPLPIAPGD LAFLQYTGGT TGVSKGAMLT
HRNVMANIEQ TRVWFGMRDD EGPGRVMVTA LPLYHIYGLT CCFFFMVRLG ACCLFVPNPR
DIAGFVKLLR TNRFTDLSGV NTLFNALLNH PDIGKVDWSA LEYVNAGGMA VQAVVARRWK
ALTGKPIIEG YGLSETAPVV SINPRTLTEW SGTIGYPVPS TEISVRDAAG AEVPIGEAGE
LCVRGPQVMP GYWRRPEETA KAMTPDGFFR TGDIAVLQPD GQLRLVDRMK DMILVSGFNV
YPNEVEDVLA THPGVLEVAV VGRPMPETGE SVVAHVVRRD PDLTAEALRA FARKNLTSYK
VPREIVFHGA LPKSNVGKVL RRELRDGGA