| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5773 |
|---|
| Symbol | |
|---|
| ID | 7303188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 5877960 |
|---|
| End bp | 5879552 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643603390 |
|---|
| Product | phage portal protein, lambda family |
|---|
| Protein accession | YP_002500905 |
|---|
| Protein GI | 220925603 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5511] Bacteriophage capsid protein |
|---|
| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAGG CACAGCCCGT CCGCTTCCGG ATCAAGGGCA CCCGCCAGTA CGTCACGCCG
ATCGCCATGG ACTTGTCTGG GGCGAAGGGC GGCGCGGCTG TCGAGGCCAC GCCATACGAT
GTCGCGGGCG GCACGGGGCG ACGTTCGCGG TCCTGGCGGA TCGGGAGCTA CGGGCCCAAC
ACCGCGATCA CCTACGCGCT CGACGAGCTG CGGCGGAAGT CGCGCGACCA AGCCCGCAAG
AACCCCTATG CCCGGGCCGC GGTCGACCGG CTCGTCACCA ACATCGTCGG AACCGGAATC
AAACCGCAGA GCACGGCCGC GATCCCGACC GACGGGCTGT CGAAGGCGCA AGTCAAGGCC
GCGAACACAG CGAGCGCCGC GTTCCGCAAG CAAGTCCAGC AGCTCTGGTG GGACTGGGTC
GATCAGGCCG ATGCTATTGG CGCCCACGAT TTCTACGGCC TCCAGGCCAT CGCGGTCCGG
GGCATGGTCG AGGGCGGCGA GACCTTCGTC CGGCTGCGCA ACCGGCGGCT CGGCGACGGG
CTCGCCGTGC CGCTCCAGCT GCAGGTCCTG GAGGGCGACC ATTGCGACGT GCTGAAGACC
GATGGCGCGG CCAACATCCG GCAGGGCATC CAGTACAATG CCATCGGGGC GCGCACCGGT
TACTGGCTCT ACCGCGAGCA CCCCGGCGAC GGCATCATCG CGGCGGGCCG TGGGCAGCAG
ACCCTCGTGC CGGCCCAGGA CGTCGCCCAC CTCTTCCGGG CGATGCGGCC CGGGCAGGAT
CGCGGCGAGC CCTGGCTCAC GCCGGCCTTG CGCACCCTCT ACGATCTCGA CGGCTACCTC
GACGCCGAGC TCGTCCGCAA GAAGAACGCG GCCCGTCTCG TCGGCTTCAT CAAGCGCGCC
ATGGAGGAGG GCGCGGACAG CCCGCTCGGC TCCGGCCCGC TCGGCACCGA CGCGCCCGAT
GCCGACGGCG TGGCGCCGCT CGACTTCGAG CCCGGCACGC TCCAGGTGCT TGCCGACGGC
GAGGACGTCA CCTTTTCGAA CCCGCCGGAC GTCGGACCGA ACTTCGAGAT GTTCGTGCGC
CAGGCGCTGC GCGGTGTCGC TACGGCGGCG GGTGTGCTCT ACGAGATCCT GAGCGGCGAC
TACAGCCAGC TCAACGACAG GACGCTGCGC GCCGCGCTCA ATGACTTCCG CCGGGCTGTG
GAAGGCTGGC AGCATCACCT CGTGATCTAC CAGCTGTGCC GGCCGGTCTG GATCCGCTGG
ATCGATCTTG CGCTGCTCGC CGGCGTGCTG ACCCTGCCGC CAGGGATGCG GCGGCAGGAC
GCCTACGCGG TGAAGTGGAC CCCGCAGGCC TGGCCCTACA TCCACCCCGT GCAGGATGTC
GAGAGCAAGG CGCTCGAGAT CCAGGCCGGG TTCTCGACCC GGTCGCAGAA GGTTTCTGAG
GGCGGCTACG ACTCCGAGGC GATCGACGCC GAGAACCAGG CCGACAACGC CCGGGCCGAT
GCGCTCGGCC TGACCTACAC CAGCGACGGC CGGCAGAAGG TCAGGGGCAG CTCCGCCGCC
TCCGTCACGC CGGCCACGTC GTCGGACGAG TAG
|
|---|
| Protein sequence | MPQAQPVRFR IKGTRQYVTP IAMDLSGAKG GAAVEATPYD VAGGTGRRSR SWRIGSYGPN
TAITYALDEL RRKSRDQARK NPYARAAVDR LVTNIVGTGI KPQSTAAIPT DGLSKAQVKA
ANTASAAFRK QVQQLWWDWV DQADAIGAHD FYGLQAIAVR GMVEGGETFV RLRNRRLGDG
LAVPLQLQVL EGDHCDVLKT DGAANIRQGI QYNAIGARTG YWLYREHPGD GIIAAGRGQQ
TLVPAQDVAH LFRAMRPGQD RGEPWLTPAL RTLYDLDGYL DAELVRKKNA ARLVGFIKRA
MEEGADSPLG SGPLGTDAPD ADGVAPLDFE PGTLQVLADG EDVTFSNPPD VGPNFEMFVR
QALRGVATAA GVLYEILSGD YSQLNDRTLR AALNDFRRAV EGWQHHLVIY QLCRPVWIRW
IDLALLAGVL TLPPGMRRQD AYAVKWTPQA WPYIHPVQDV ESKALEIQAG FSTRSQKVSE
GGYDSEAIDA ENQADNARAD ALGLTYTSDG RQKVRGSSAA SVTPATSSDE
|
|---|
| |