Gene Mnod_5643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5643 
Symbol 
ID7305736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5769287 
End bp5770180 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID643603271 
Productdihydrodipicolinate synthetase 
Protein accessionYP_002500786 
Protein GI220925484 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTC TGAAAGGACT CTCCGCCTTT CCCATCACGC CGTCCGATGC CGATGGCCAA 
GTCGATGTTG CGGCCTTGCG CCGGCTGCTC GCCCGCCTGG TTGCGGCGGG GGTCGATTCC
ATCGGCCTCC TCGGCAGCAC GGGGTCCTAC CCCTATCTGT CGCGCGCCGA GCGCTGCCGC
GCCCTCGAAG CGGCCGTCGA TGAGGTGGGA GAAGAAATCC CAATCTTGGT CGGGGTCGGC
GCACTCCGCA CCGACGAGGC GGTGCGGCTC GCCCAGGATG CTCGGGCCGT GGGAGCTGCG
GCCGGGTTGT TGGCCCCCGT CTCCTACACG CCGCTGACGG ACGACGAGGT GTTCGAGCAC
TTCGCCACGG TCGCGCGCGA GAGCCGCCTG CCCCTGTGCA TCTACGATAA TCCCAGCACC
ACGCACTTCA CGTTCAACCC GGTGCTGGTG GGCCGCATCA GTCACCTTCC CGGCGTGGTG
GCGGTGAAGA GCCCGGCCCC AGCCCCGCAG TCGATCGCGG GCCACCTCGG CGCGTTGCGC
GCGGTCGTGC CGGACGGCTT CTCGCTCGGC TACAGCGGAG ACTGGAACTC GGTCGAAGCC
CTGCTGGCGG GCGCAGATGC ATGGTACTGC GTTGCGGCTG GACTGTTTCC GGAGACCTGC
ATGGCCATCG TGGAGGCAGT TCAGGGCCAG CGAGCCGACG AGGCCCGGCG GCTGAACGCC
AATCTCCAGC CGCTCTGGGA CCTGTTCAAG GAGTTCTCCA GTCTGCGGGT CATGTACGCC
GCCGCCGACG TGCTCGGCAT CTGCTCCGCG CAGCCACCGC GGCCGATTCT GCCCCTCCTC
GAGCCGGCCC GGCGGAAGGT TGCAGAGACG CTGATCAGCA TGAGCTTGCG CTGA
 
Protein sequence
MTVLKGLSAF PITPSDADGQ VDVAALRRLL ARLVAAGVDS IGLLGSTGSY PYLSRAERCR 
ALEAAVDEVG EEIPILVGVG ALRTDEAVRL AQDARAVGAA AGLLAPVSYT PLTDDEVFEH
FATVARESRL PLCIYDNPST THFTFNPVLV GRISHLPGVV AVKSPAPAPQ SIAGHLGALR
AVVPDGFSLG YSGDWNSVEA LLAGADAWYC VAAGLFPETC MAIVEAVQGQ RADEARRLNA
NLQPLWDLFK EFSSLRVMYA AADVLGICSA QPPRPILPLL EPARRKVAET LISMSLR