| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5612 |
|---|
| Symbol | |
|---|
| ID | 7305705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 5738612 |
|---|
| End bp | 5740069 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643603242 |
|---|
| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| Protein accession | YP_002500757 |
|---|
| Protein GI | 220925455 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAACG GCAACACGGC AATGTCCTCG GTCGGGACGG TCGCGCGCAC GACCCGCGCC
GAGCGCCGCC CCGCACGCCG CGGGCGGCGG AGTGTCGTGG CGGGCGCGCT TTTGGCCGGC
GATGCCATGG TCGCAATCGC GGCCGCGGTG GCGGCGAGCG GCCTGCTGCA GCTCGGCGGA
GTTCCGGTGC AGGCGAATGC GGCGCTCGCC GGGCCACTCA CTCTTCCCAC CCTGGCGGTT
CTCCCCATCT TCGCGGCCCT CGGCCTCTAC GGGAGCGACG GCCCGAGCCC TCCGGAGCGG
CTGCGGTTGC GCGCCCTCGG CCTCGTCCTC TACGCGATTG CCTGCCTGCT CGTCGCCGCC
GGCAGGGTCA CGCCGCATCA CCTCGGCGCG ATCACCCTCG TCGCCGGGCT TCTCCTCGTG
CTCGGCTACT ACAGCGAATG GGCGGTTCAG CGCGTCCTGA TCCGGGCCGG CGCCTGGGGC
GCCCCCACGC TCATCATCGG GGCGGACGAG GCGGGTCGCG CCCTCGCCCG CACCCTGCTC
GCCCAGCCCG AGCTCGGCCT CAGGCCGATC GGCATCGTCG CCGACCGGAT CCCCGAGGCG
CCGCCCGAAC AGCTGCCGCT CGTCGACTCC CTCGACGCGA CGGGCCTCTC CTCCGCGGAG
GTGATCGTGT TCTCCTCCTG CGCCGAGCTC GCCCGGCACG ACGGGATCCG CAGCGGAGCC
GGGCCATCCG CCCGTCTCCT GCTCGCCCAG AGGATCGAGG ACCTGCAGGA TCTGTGGCTG
CAGGTGCGTC CGCTGGGCGG CGCCGTCGGT CTCGAGATCC GGCGCGAACT CTACCGGCCG
CGCAATCTGC TGCTCAAGCG GATGCTCGAC GGCGTGCTCG CCGGCCTCGG CCTCCTGGTC
GTCGCCCCGC TCATCGCCCT GCTGGCGGGT CTGATCACGC TCGCCGATCC GGGGAGTCCG
TTCTACGTCC AGGTCCGGGT GGGACGGAAC GGGCGCCCGA TCCGCGTGCT CAAGCTGCGC
ACCATGTATC GGGACGCCGA GCAGCGGCTG CGCGACCATC TCGAGGCCAG CCCGGCCGCT
CGCGCCGAGT GGCAGCGGTT CTTCAAGCTC GCGGACGATC CCCGCGTGCT CCCGAAGGTG
GGGCACTTCC TGCGCCGCAG CAGCCTGGAC GAGTTGCCCC AGCTCTGGAA CATCCTGCGC
GGCGACATGA GCCTCGTTGG CCCGAGGCCG TTCCCGTCCT ATCACCTGGA CGGCTTCGGC
CCCGCCTTCC GCCGCCTGCG GACGAGCGTG CCGCCGGGCC TGACCGGCCT GTGGCAGATC
TCGGCGCGCA GCGACGGCGA CCTCGCCGTC CAGGAGAGCC AGGACACCTA CTACATCCGC
AACTGGTCGC TCTGGCTCGA TCTCTACATC CTGCTGGCGA CGATCCCGGC CGTTCTCGGC
GCCAAGGGTG CCCGCTGA
|
|---|
| Protein sequence | MRNGNTAMSS VGTVARTTRA ERRPARRGRR SVVAGALLAG DAMVAIAAAV AASGLLQLGG
VPVQANAALA GPLTLPTLAV LPIFAALGLY GSDGPSPPER LRLRALGLVL YAIACLLVAA
GRVTPHHLGA ITLVAGLLLV LGYYSEWAVQ RVLIRAGAWG APTLIIGADE AGRALARTLL
AQPELGLRPI GIVADRIPEA PPEQLPLVDS LDATGLSSAE VIVFSSCAEL ARHDGIRSGA
GPSARLLLAQ RIEDLQDLWL QVRPLGGAVG LEIRRELYRP RNLLLKRMLD GVLAGLGLLV
VAPLIALLAG LITLADPGSP FYVQVRVGRN GRPIRVLKLR TMYRDAEQRL RDHLEASPAA
RAEWQRFFKL ADDPRVLPKV GHFLRRSSLD ELPQLWNILR GDMSLVGPRP FPSYHLDGFG
PAFRRLRTSV PPGLTGLWQI SARSDGDLAV QESQDTYYIR NWSLWLDLYI LLATIPAVLG
AKGAR
|
|---|
| |