Gene Mnod_5545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5545 
Symbol 
ID7306972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5657806 
End bp5658933 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content71% 
IMG OID643603175 
Productprotein of unknown function UPF0118 
Protein accessionYP_002500690 
Protein GI220925388 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0252141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCAGC GCCGCGCCAC GATCGTGCTC GCCCTGCTCG CGGTCGTGGT CTTCCTGCTC 
TATCAGCTCC GCGACGTGCT GGTTCCGTTC GTGGCGGGCG CGGCGCTCGC CTACGTGCTC
GACCCGATCG CCGACCGGCT GGAGCGCCTC GGCATCGGGC GGCTCGCCGC GACCTTCACC
ATCCTGGCCG TCTTCGTGCT GCTGCTGGTG CTCGCGCTCA TCATCGCGGT GCCGCTCGCC
GCGCGCCAGA TCGGGGCGCT CGTCGCCACC CTGCCGGGGA CCGTCTCGCG CATCCAGGCG
ATCATCGCGG ACCATGCCGG CCCGCTGCTG GAGCGGGCGG GCGGGGCGGG CACGCTCCAG
GACCTGCAGG CGTCCGTCGG GCGCCTCGTC GGCCAGGCCG GGAGCTGGAT CGTCAATCTC
GTCGGCTCCC TGTGGTCGGG GAGCCAGGCG ATCGTCGGCA TCCTGTCGCT CCTCGTCGTC
ACGCCCGTCG TCGCCTTCTA CCTCCTCGTC GACTGGGACC GGATGATCGC GACCCTCGAC
GGTTGGGTGC CGCCCCGCCA CCGCGACACG GTCCGGATGC TCGCCCGCGA CATCGACGCG
GCGATCACCA GCTTCATCCG CGGCCAGAGC CTGGTCTGCC TGCTGCTCGG CACCTTCTAT
GCGGTCGGCC TGTGGCTGAT CGGGCTGAAT TTCGGGGTGC TGATCGGCAT GATGGCCGGG
TTCCTCACCT TCATTCCCTA TGTCGGCTCG CTCACCGGGT TCCTGCTCTC CGCCGGCGTC
GCGGTGGTGC AGTTCTGGCC GGACTGGACC TGGATCCTGG CGACCCTCGG GGTGTTCCTC
GTCGGGCAGT TCCTGGAGGG CAACGTGCTT CAGCCCAAGC TCGTGGGCGA CGCCGTGCGG
CTGCATCCGG TCTGGCTGAT GTTCGCGCTC CTCGCCTTCG GCTCGCTCTT CGGCTTTCTC
GGCCTGCTGC TGGCGGTGCC GATCGCGGCG GCGCTCGGCG TCATCGCGCG CTTCGGCGTG
CGCCGCTATC TCGAGAGCAC ACTCTACCGC ACCGGCGCGC CGCCCCTGGC CGCGCCGGCG
CCGACACCGC TGCCGGTGGC CGATCTCGAC ACGCGGGGCC GCGCCTGA
 
Protein sequence
MLQRRATIVL ALLAVVVFLL YQLRDVLVPF VAGAALAYVL DPIADRLERL GIGRLAATFT 
ILAVFVLLLV LALIIAVPLA ARQIGALVAT LPGTVSRIQA IIADHAGPLL ERAGGAGTLQ
DLQASVGRLV GQAGSWIVNL VGSLWSGSQA IVGILSLLVV TPVVAFYLLV DWDRMIATLD
GWVPPRHRDT VRMLARDIDA AITSFIRGQS LVCLLLGTFY AVGLWLIGLN FGVLIGMMAG
FLTFIPYVGS LTGFLLSAGV AVVQFWPDWT WILATLGVFL VGQFLEGNVL QPKLVGDAVR
LHPVWLMFAL LAFGSLFGFL GLLLAVPIAA ALGVIARFGV RRYLESTLYR TGAPPLAAPA
PTPLPVADLD TRGRA