Gene Mnod_5534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5534 
Symbol 
ID7306961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5644445 
End bp5645209 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content72% 
IMG OID643603164 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_002500679 
Protein GI220925377 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.084902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCTCC TTCTGCCCGG GCTCGCGGCG TCCTACCTCC TCACCTTCGC GCGGGTGGGC 
ACGCTCATCA TGCTGATGCC CGGGATCGGC GAGGCCGTGG TCTCGCCCCG CCTGCGCCTC
GCCTTCGCGC TCCTCGTCGC CCTGGTGCTG TTCCCGGCGG TGCGCCCGCT GCTGCCGCAG
CCGGACGGGG CCGGAGCCGG GCCCCGGCTC ATCGGCGTGC TGATCGGGGA GGTCGCGGTC
GGGCTGGTGC TGGGCCTCAG CGTGCGCGCG GTGCTCGCCG CCCTCCAGAC CACCGGCACC
ATCATCGCCC AGCAACTGGG CCTCGCCTAC GCGATGACGG TCGATCCGAC GGCGGCGGGC
CAGCAGGCGA CGCTCGGCAC CTTCCTCACC CTGCTCGGCA TCACCCTGGT GCTCGCCGCC
GATCTCCACC ACCTCGCCAT CGCGGGGATC CGCGACAGCT ACGCGCTGAT GCCGCCGGTC
GGCGTGCCGG CCACCGGCGA CGCGGCGGAT CTCGTCATCC GGGCGGTCGC CCGGGGCTTC
GCCCTCGCGG TGCAGATCTC GGCGCCCTTC ATCGCCTTCG GCATCCTGTT CAACCTCGGG
CTCGGCGTGC TGTCGCGGCT GATGCCGCAG ATGCAGGTGT TCTTCGTCGC CACCCCGGCC
TCGATCCTGA TCGGCATGAT GGTGCTCTTG GCGACGATCG GGGTGGTGAT GGGCGTGTTC
GTGGACGATC TCGGCCGCTG GCTCGGCCAG TTCGGGAGGC TCTAA
 
Protein sequence
MNLLLPGLAA SYLLTFARVG TLIMLMPGIG EAVVSPRLRL AFALLVALVL FPAVRPLLPQ 
PDGAGAGPRL IGVLIGEVAV GLVLGLSVRA VLAALQTTGT IIAQQLGLAY AMTVDPTAAG
QQATLGTFLT LLGITLVLAA DLHHLAIAGI RDSYALMPPV GVPATGDAAD LVIRAVARGF
ALAVQISAPF IAFGILFNLG LGVLSRLMPQ MQVFFVATPA SILIGMMVLL ATIGVVMGVF
VDDLGRWLGQ FGRL