| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5528 |
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| Symbol | |
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| ID | 7306955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 5636195 |
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| End bp | 5638837 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643603158 |
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| Product | diguanylate cyclase/phosphodiesterase with extracellular sensor |
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| Protein accession | YP_002500673 |
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| Protein GI | 220925371 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.785469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGAAC TGGCGGATAG GAGGGATACG GCCGCCCCGG GCCGGCCCGG CAGCGTGCGA
TCCCCGGTGC GGCGGGCGCC CGGGCCGTGG CGTCGTCTGT CGCGCGCGGC CCGGCGCCTC
TGGCGCCGCC TGCGGCCCGA TTCGCAGATC GGCGCGCATC TCGCCGGCAC CGTTCTCCTC
ACCGGCGCTC TCACCTTCGC CATCGTCGGC CTCGTGGCGC TTCAGCGCCT GAACCAGGAT
GCGGCCGAGC GCGCCCGCGC CGTGTCGCTC CTCTCCCGCG AGCAGGTCGC GCGCAAGCTC
GACGGGGAGG CCCGCCTCGC CGACGCGCGC CTCGACGGCC TCTTCGACGA GGCGGCGCGG
CAGACGCGGT TCCTGGCGCA GCGCCTCGAC ATCGTGAAGG CGGTGGGCTC GGCCAACAGC
GTCGCCCTGC GGGAACTGCT CGCCCCCGCC GCGGTCACGG GCGACCTCGA TGCCCTCGTG
GTCACCGACC CCCAGGGGAT CGTCACCGGA TCGAGCAGCG GACCCGACCT GCTCGCCCTG
ACGGAGGCTG TCGACGCGGC GGAGATCGAC CTGGCCATCC GCGACGTGCT GACGGAGAAC
AGCCGCGTGC GGCGCCGGGC CGTCAGCCGC ATGTTCCAGC TGACCGATCC CCTGCGCATC
GCGCTCGGGC TGCCGGACGA GCGCAGGATC GGGCAGATCA CCGTCGAGCC GGTCTTCGAC
GATTTCGGCG ATGCGGCCGG CGCGCTGGTC GGCCTGCGCA TGCTCGGCCC CTCGGAGGGC
ACCTTCATCC GCTTCTCGGC GCTCACCAAG GTGGGCGTCG CGGTGCTGGC GGGCGGCCGC
AGCGTCTCGG AAGCGGGCGA GCCGGTCGCC GGCCTCGTCC CGCGGACCGA TCTCGACGAG
GACGGGCTGA TCGTCTCGGC CGACGGTGCG CGGGTGGCAC GCTGCGTGTC GCATGACGGG
TCCCTGGCCG TCTGCGCCCA TTCGGACGGG GCCGAGGTCG GGGCCGCGGC GCAGGAGATC
ATGCGGCTCG GCGTGATGCA GACCCGGTCG CTCTTCGCGT GGTTCCTGCT GCTCGCCGCC
TGCTCCCTCG GCCTCCTGGT CCTGGTGGTT CTCGGCGCCG TGCGCCGGGT GACGAGCGGC
CTGCCGCAGC TCTCCACCGC CGCGAGCGCG GTGGCGCGCG GGGAGCTCGA CGTGCCCTTC
CGCGCCTCCG GTCTCGGCGA GGTGAGGAGC CTGGGACGGG CCTTCGAGAC GATGCTCGCC
AACCTGCGCG AGAGCCTCGG ACGGGTGCGC CAGCTCGCCT TCTTCGACCC CGTCACGGGC
CTCGCCAACC GGGAGAAGAT GCGGATCGAC GGCACGGCGG CGCTCGCCGG CCGCCGCCAG
GACGTCGCCT TCCTGTTCCT CGACCTCGAC CGCTTCAAGT CGGTCAACGA CACCTTCGGC
CATCGGGCCG GCGACGCACT CCTCTGCCAG CTCGCGCTGC GCCTGGCCGG CTTTCTGGAG
GAGCGCCGCC AGACCGGCGC CCTCGGCCAT TTCTGGCTCG GGCGGATCGG CGGGGACGAG
TTCCTGATCG TCGCGAGCGG GCGGCTGACC TGCGAGGGCT TACGCCGCTG CGGCGAGGAT
CTCATCGCGG CCGTCAGCGA GACCTACACG ATCGGCAGCG CCCACATGGC GGTCGGCGCG
AGCATCGGCG TCGCGTTCGC GGAGGAGGGC TGCAGCTACG ACGACCTCCT GGTCCGGGCG
GACATCGCCA TGTACGAGGC CAAGCGCCAC GGCCGGGGCA CTTGCACCTT CTTCACCGCG
GAGGCGGCGC AGCGGGTGCA GGAGCGGCTC GGCATCGAGA GCGACCTGCG CTGCGCCCTC
AAGGCCCGCG AGTTCGGCGT GCACTACCAG CCCAAAGTGT CGCTGAGGGA CGGGCGGGTG
GTCGGCGCCG AGGCGCTGGT GCGCTGGCAC CACCCCGAGC GCGGGCCGGT CCCGCCCGGA
AAATTCATCC CGGTGGCCGA GGAGGCCGGG CTGATCCCGG ATATCGGGCT GTTCGTGCTC
GAGCGCGCCC TGGAGGAGAT CGGCGCCCTC GTGGCGCGTG GGCACGACCT CGCGGTCGCC
GTCAACGTCT CGGTGCTGCA GCTCGAAGAC CCGACCTTCG CGCGCACCGT GGAGGATCGC
CTCGCGGCGG CCGGGATCCC GCCGCGCTGC CTCGAACTGG AGATCACCGA GACGGTGGCG
ATGCGCGAGT CCGAGATCAT CCAGGGCCAC ATCGCGCGCC TGCGGATGCT CGGCGTGCGC
TTCTCGATCG ATGATTTCGG AACCGGCTAC TCGAACCTCG CCATGCTTGC CCGCTCGCCG
ATCGACGCCC TGAAGCTCGA CCGCTCGCTC GTCGACGGCG TTGCCGGCAG CAACGAGCAG
CAGACCATCG TGCGCACCAT CCTGTCGCTC GCCGCCTCGC TCGGCTTCGA GACGGTGGTG
GAGGGCGTCG AGACCGATGC GGATCTGCGC TTCCTGATCG CGGAGGGCGC GACGACCGCG
CAGGGCTACC TGTTCAGCCC GCCGGTGCCG ATCGACACCT TCCGGACCTT CCTGGAGCCG
GGCCGGCTTC AGGAGCTGTG GGCCCGGTCC GGCGGTGCGG CGCGGCGGCC GCGCTCGGCG
TGA
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| Protein sequence | MPELADRRDT AAPGRPGSVR SPVRRAPGPW RRLSRAARRL WRRLRPDSQI GAHLAGTVLL
TGALTFAIVG LVALQRLNQD AAERARAVSL LSREQVARKL DGEARLADAR LDGLFDEAAR
QTRFLAQRLD IVKAVGSANS VALRELLAPA AVTGDLDALV VTDPQGIVTG SSSGPDLLAL
TEAVDAAEID LAIRDVLTEN SRVRRRAVSR MFQLTDPLRI ALGLPDERRI GQITVEPVFD
DFGDAAGALV GLRMLGPSEG TFIRFSALTK VGVAVLAGGR SVSEAGEPVA GLVPRTDLDE
DGLIVSADGA RVARCVSHDG SLAVCAHSDG AEVGAAAQEI MRLGVMQTRS LFAWFLLLAA
CSLGLLVLVV LGAVRRVTSG LPQLSTAASA VARGELDVPF RASGLGEVRS LGRAFETMLA
NLRESLGRVR QLAFFDPVTG LANREKMRID GTAALAGRRQ DVAFLFLDLD RFKSVNDTFG
HRAGDALLCQ LALRLAGFLE ERRQTGALGH FWLGRIGGDE FLIVASGRLT CEGLRRCGED
LIAAVSETYT IGSAHMAVGA SIGVAFAEEG CSYDDLLVRA DIAMYEAKRH GRGTCTFFTA
EAAQRVQERL GIESDLRCAL KAREFGVHYQ PKVSLRDGRV VGAEALVRWH HPERGPVPPG
KFIPVAEEAG LIPDIGLFVL ERALEEIGAL VARGHDLAVA VNVSVLQLED PTFARTVEDR
LAAAGIPPRC LELEITETVA MRESEIIQGH IARLRMLGVR FSIDDFGTGY SNLAMLARSP
IDALKLDRSL VDGVAGSNEQ QTIVRTILSL AASLGFETVV EGVETDADLR FLIAEGATTA
QGYLFSPPVP IDTFRTFLEP GRLQELWARS GGAARRPRSA
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