Gene Mnod_5507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5507 
Symbol 
ID7306934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5616193 
End bp5617242 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID643603139 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_002500654 
Protein GI220925352 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCC TCGTCACGGG CGGCTGCGGC TTCATCGGCT CGGCCCTGGT CCTGCATCTG 
GTCCAGGAGC GCGGCCATGA CGTCCTCACC CTCGACGCGC TCACCTATGC GGCCAACCCC
CTCTCGCTGC AGCCGCTGCG GGATGACCCG CGCCACCGCT TCGCCGAGGC CGACATCTGC
GACCCTGAGC GGGTGAATGC CCTGTTCGAG GAGTTCCAGC CGCAGGCGGT GATGCATCTG
GCGGCCGAGA GCCATGTCGA CCGCTCGATC ACCGGGCCGG CCGCCTTCAT CCGCACCAAC
GTGGTCGGCA CCCAGGTGAT GCTGGAAGCC GCCCGCGCCC ACTCCACCCG CCTGTCGGAC
GGGGCGAAGC AGGCCTTCCG CTTCCTGCAC GTCTCCACCG ACGAGGTCTA CGGCTCGCTG
CCGCCGGGCG GCTTCTTCAC CGAGGAGAGC CGCTACGATC CGCGCTCGCC CTACTCGGCC
TCGAAGGCCG CCTCCGACCA CCTGGCGCGG GCCTGGCACG AGACCTACGG CCTGCCGGTG
CTGGTCACCA ACTGCTCGAA CAATTACGGG CCGCGCCACT TCCCCGAGAA GCTGATCCCG
CTGATGATCC TCAACGCGCT CGAGGGCAAG CCGCTGCCGG TCTACGGCGA CGGCCAGAAC
GAGCGCGACT GGATCCATGT GGAGGACCAC GCCCGCGGCC TCGTCGCCGT GCTGGAGGGG
GGCCGGATCG GCGAGACCTA CCTGCTGGGC GGGCGCGCGG TGCGCAGCAA CCTGGAGGTG
GTGAAGACGC TGTGCGCGAT CTTCGACCGG CTGCGGCCGG AGGCCGGCCC GCACGAGCGG
CTGATCACCT TCGTGACCGA CCGGCCGGGC CATGACCGGC GCTACGCCAT TGATCCGGGC
AAGGCCGAGC GCGAGCTGGG CTGGCGCCCG ACGCGCAGCT TCGAGCAGGC CCTGGAGGAC
ACGGTGCGGT GGTACCTCGA CAACAAGGAT TGGTGGCAGC CGATCCGGGA GGGCCGCTAC
ACCGGCGAGC GCCTCGGGCT GACCGGCTGA
 
Protein sequence
MRILVTGGCG FIGSALVLHL VQERGHDVLT LDALTYAANP LSLQPLRDDP RHRFAEADIC 
DPERVNALFE EFQPQAVMHL AAESHVDRSI TGPAAFIRTN VVGTQVMLEA ARAHSTRLSD
GAKQAFRFLH VSTDEVYGSL PPGGFFTEES RYDPRSPYSA SKAASDHLAR AWHETYGLPV
LVTNCSNNYG PRHFPEKLIP LMILNALEGK PLPVYGDGQN ERDWIHVEDH ARGLVAVLEG
GRIGETYLLG GRAVRSNLEV VKTLCAIFDR LRPEAGPHER LITFVTDRPG HDRRYAIDPG
KAERELGWRP TRSFEQALED TVRWYLDNKD WWQPIREGRY TGERLGLTG