Gene Mnod_5502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5502 
Symbol 
ID7308015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5608167 
End bp5610608 
Gene Length2442 bp 
Protein Length813 aa 
Translation table11 
GC content77% 
IMG OID643603134 
Productpeptidase C14 caspase catalytic subunit p20 
Protein accessionYP_002500649 
Protein GI220925347 
COG category[R] General function prediction only 
COG ID[COG4249] Uncharacterized protein containing caspase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAGG CCGTACGGAT CGTCTTGCTG ATGCTGGCCG CAGCCGTGGT GCTGCCGCTC 
GCCGCCCCCC TTGCGGCGCC GGCCGAGACG CGGATTGCCC TGGTGATCGG CAACGGCGCC
TACGCGGCAG GCGCGCTGCC CACGGCGGCC AACGATGCCG GCCTCGTCGC GCAGACGCTG
CAGGCGGCAG GCTTCGATGT GGTCGGGGCC CGCGATCTCG ACGAGGACGG CCTGCGCCGG
GCCCTGCGGG ACTTCACCGA CAAGGCCGCC GCGGCCGGGC CCGAGGCCGT CGCCTTCGTC
TATCTCTCGG GCTATGGCCT CCAGCTCGAA GGCGAGAACT ATTTCGCGCC TGTGGATGCG
CGCATCGCCA CGGCCTCCGA CGTACCGCTG CGGACCCTGC GGGTCTCGGA TTATGCCAGG
CGCCTCGCGG CGCTGCCGCT CCGGGCGCGG TTCCTGGTGC TCGATGCCGC CCGCAAGGCG
CCCTTCCGGA TCGAGGGCGA TCCGCTCGCG GGCGGCCTCG CCCTCAGCGA GGCGGAGCCG
GGATCGCTCG TCGCCTTCAA CGCCGCGCCC GGCACCGTCG GCCCGGACGA GACGGGCCCT
TACGGCGCCT ATGCGCGCGC GCTCGTCGAG ATGATGCGCG AGGGCGGCCT GAATCCGGGC
GACCTCTTCG AGCGGGTCCG GCTGCGGGTG AGTGAGACCA CGGGTGGGGC CGAGCTGCCC
TGGCACAGCG CCCGCATCGA GGCGCCGTTC GTGTTCTTCG AGCGGGCGCC GGACGCGCCT
CCCCTCGCCC GGCAGGCCGG CCCGGCCGCG GACCGGCGGC CGCTCGCCGA GATCGGGCCG
CAGGAGGCCT TCGCGCGCTG CATCGCGCGC GACACGCTCG CTGGCTACGA GGAGTTCCTC
GGCGCCTACC CGCAGGACCC GCTCGCCAAC CGCGTGCGGG CGATCGTCGC GGCGCGGCGC
GAGGCGGTGA CTTGGCGCCG CTCGCGGCTC GCCGACACGC CGGACGCCTA TTGGTCCTAT
CTCGGCCGTT ATCCGCGGGG TCCGCACGCC TGGGATGCGC GCCGGCGCCT GCGGCAGCTC
GCCGCCGCGG CCGAACCGCC GCCGCATTTC GCCGCCCTCG CCTACGACGT GCCGCCGCCC
CCGCCCGAGG AGGTGGTCTA TCTGGAGCGG CCCGCCCTCG TCCTCGACGA TCCGGCCTAC
GACCTGCCGC CGCCCCCGGT CTACCTCCCG CCGCGGCCCG CCTTCATCGC GGATCTGCCG
CCGCCTCCGC CCGTGGTGGA GGAATACGTC CTGCCGGTGC CCGCCTTCGT GCCGGTCCCG
GCCTATATCC GCCCGCCGCA GGTCGTCGCC GCGCCGCCCG GCAATGTAAT CTACGAGCAT
CTCCATGACG CCGCCGCGAT CGAGCGGATC AACGCCGCCA ATGCCGCGCC GGCCCGTGCG
GGCCTCTCCG GCAGCACGAT CGCGGCGGGC GTCGCCGGAG CGGCGATCGG CGCGGCGGTG
GCCCGGGTGG CGCTGCCGCC CTCTGTGTCC CAGAAGGCTG CCCTTCGCCC GAGCCTGCCC
GCCGGCCCGG CGTCCCCGGC GACGGGCCAG AGAGTGCCGG GTCCGGCTCC CGGCGCGCAG
CCGGGCCGAT TCGGACCTCA AGGCCAACCG GTGCCCCAGC AGGCCGGACG ACCGAACGGC
CCGGCTGCGC CGGGACAGGC TCTGCCCGTC CCCGGCGCGA TCCCGCCAGG CCAGCAAGCC
GGCCGTCCGG CTCCCGCCGC TCCCCAGCCG GCCCTGCGGC CGCAGGGTCC CGCGGCCGCG
TCGACGGCAG CGCCCGGCCC GGCAGCGGGC CAGCCCCTCC CCTCACCCGC CCGGCAGGCC
ATCCGGCCGG TCCCCGGCCC GGGCGAGGCG GCGCCGGGCG CTCCCCCGGC CCAGCCTCGA
CCGGCTCAGA CCGCCCCGCG GCAGGGTGCG CAGCCGCATG GTCCGGGCCG GCCCATCCCG
GCCGCACCGC CCCCGAATCC GCCCGGACCA GCCCTCGCCC GGCCCCCGGC CGCACCCGCC
GCGCATCCGC AGGCGGAGAT CGCCCGCCGC CAGCAGCTCC AGCAGGAGCA GGCCGCCCAG
GCACAGCGCG CCGCGGCCCA GCGCCAGCAG CAGATGATGA TGCAGCAGCG CCAGCAGCAG
GCCGTGCAGG CGGCGGCCCG GCAACAGCAG CTGGCCGCCC AAGCCGCCGC GCACCGGCAG
CAGATGATGC AGCAGCAGGC GGCCCAGGCC GCCGCGCGTC AGCAGCAGAT GATGCAGCAA
CAGGCCGCGG CCCGGCAGCA GCAACAGCTG GCGGCCCAGC GCCAGCAGAT GATGCAGCAG
CGCCAGCAGC CGGTGGCGCC ACGGCCGGCG CCGGGGCCGC ATCCGGCGCC CGGGGGCGGA
GGACGGCCCT GCGGTCATCC GGGCCAGCCG CCCTGTCGCT GA
 
Protein sequence
MPQAVRIVLL MLAAAVVLPL AAPLAAPAET RIALVIGNGA YAAGALPTAA NDAGLVAQTL 
QAAGFDVVGA RDLDEDGLRR ALRDFTDKAA AAGPEAVAFV YLSGYGLQLE GENYFAPVDA
RIATASDVPL RTLRVSDYAR RLAALPLRAR FLVLDAARKA PFRIEGDPLA GGLALSEAEP
GSLVAFNAAP GTVGPDETGP YGAYARALVE MMREGGLNPG DLFERVRLRV SETTGGAELP
WHSARIEAPF VFFERAPDAP PLARQAGPAA DRRPLAEIGP QEAFARCIAR DTLAGYEEFL
GAYPQDPLAN RVRAIVAARR EAVTWRRSRL ADTPDAYWSY LGRYPRGPHA WDARRRLRQL
AAAAEPPPHF AALAYDVPPP PPEEVVYLER PALVLDDPAY DLPPPPVYLP PRPAFIADLP
PPPPVVEEYV LPVPAFVPVP AYIRPPQVVA APPGNVIYEH LHDAAAIERI NAANAAPARA
GLSGSTIAAG VAGAAIGAAV ARVALPPSVS QKAALRPSLP AGPASPATGQ RVPGPAPGAQ
PGRFGPQGQP VPQQAGRPNG PAAPGQALPV PGAIPPGQQA GRPAPAAPQP ALRPQGPAAA
STAAPGPAAG QPLPSPARQA IRPVPGPGEA APGAPPAQPR PAQTAPRQGA QPHGPGRPIP
AAPPPNPPGP ALARPPAAPA AHPQAEIARR QQLQQEQAAQ AQRAAAQRQQ QMMMQQRQQQ
AVQAAARQQQ LAAQAAAHRQ QMMQQQAAQA AARQQQMMQQ QAAARQQQQL AAQRQQMMQQ
RQQPVAPRPA PGPHPAPGGG GRPCGHPGQP PCR