Gene Mnod_5488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5488 
Symbol 
ID7306919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp5593158 
End bp5593676 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content71% 
IMG OID643603120 
Productpeptidoglycan-associated lipoprotein 
Protein accessionYP_002500635 
Protein GI220925333 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.429117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGC CGCTCGCCTC GTCGCGCGTG CTCAGGGCCG CCGTCGCGGT CGGTCTCGCC 
CTGTCGATCG CCGCCTGCTC GTCGAACAAG GACCTCGCGG ACGCCTCCGC CTACGCGGCC 
GGCGGCGGCG CCGGCGGAGC CGCCACGCCC GGCAGCGCCC AGGACTTCGT CGTGAATGTC 
GGCGACCGGG TGTTTTTCGA GACCGACTCG ACGGACCTCA CCCCGACCGC GACCGCGACC 
CTCGACAAGC AGGCCCAGTG GCTGTCGCGC TATCCGCACT ACACCTTCCT GATCGAAGGC 
CATGCCGACG AGCGCGGCAC CCGCGAATAC AACTTCTCGC TCGGCGCCCG CCGCGCCCAG 
ACGGTGCGGG ACTATCTCGC CTCGCGGGGC ATCGCGGGCT CGCGGATGCG CACCGTATCG 
TACGGCAAGG AGCGGCCGGT CGCGGTCTGC AACGACATCT CCTGCTGGTC GCAGAACCGC 
CGGGCCGTCA CCGTGCTCGA TGGCGGCGCG AGCTCTTGA
 
Protein sequence
MSLPLASSRV LRAAVAVGLA LSIAACSSNK DLADASAYAA GGGAGGAATP GSAQDFVVNV 
GDRVFFETDS TDLTPTATAT LDKQAQWLSR YPHYTFLIEG HADERGTREY NFSLGARRAQ 
TVRDYLASRG IAGSRMRTVS YGKERPVAVC NDISCWSQNR RAVTVLDGGA SS