Gene Mnod_5412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5412 
Symbol 
ID7302001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5497150 
End bp5498190 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID643603043 
ProductCRISPR-associated protein, Cse4 family 
Protein accessionYP_002500559 
Protein GI220925257 
COG category 
COG ID 
TIGRFAM ID[TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.995476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAT TCTTCCAGCT TCACGTGCTG ACCGCTTACC CGCCGGCGAA CCTCAATCGC 
GACGACACCG GCCGGCCGAA AACCGCTAGG GTTGGTAACG TCGACCGGCT GCGGGTTTCC
TCCCAAGCTC TCAAGCGAGC CTGGCGCTCA TCAGACGCTT TTGCGGAGGC GCTCGCCGGC
CACCTCGGCC AGCGCACGCA GCGCCTCGGC GAGACAATCG AGGGGCACCT CATCGACCGC
GGCGCTGACC CAGCCACCGC CCGCACAGCA GCCCGCGCCG TTGCCGAGCG CTTCGGCAAG
CTCAAGAGTG AAGGGGATAA GAAGCCGACC CACATCGAGC AGCTCGCCTT CATCTCGGCG
GATGAGCGCA AGGCCGCCTT CGCGTTGGCC GAGCGGCTGG CTGCTGGCGA GACGGTCGAT
GTCGATAAGG CGCCGCTCCT GCGCCGTGCG GACGGTGCCG TCGATGTCGC GATGTTCGGG
CGCATGCTGG CCGACAGCCC GGAATTCAAC CGAGAGGCAG CCGTACAAGT GGCTCATGCC
TTCACGACCC ATCGGGCCCC TGTCGAGGAC GACTACTATA CCGCCGTGGA TGACCTCAAA
GGCCCGCAGG AGGATGCGGG CGCCGGCTTT GTCGGCGAGG CCGGGTTCGG CTCGGGCCTG
TTCTACCTCT ACGTCTGCAT CGACCGCGAC CTCCTGGTGC GCAACCTCGC CGGCGATGAG
GATTTGGCCC GGGCCGGCCT CTCCGCCGTC GTGCGAGCCG TCACCACGGT GGCGCCCCGC
GGCAAACAGG CCAGCTTCGC GAGCCGTGCG CGGGCAAGCT TCGGTCTGCT TGAGCGCGGC
AGCGAGATGC CCCGGACCTT GGCGGCCGCC TTCCTCAAGC CGGTCGGAGG CGAGGACGTG
CTGGAGACCT CGATCGCTCG CCTGCTGAGC TTGCGCGAGA GTTTCGCCCG GGCCTACGGC
GACGAGGCGG AAACCGCGAT CATGAACGTG CCGGCCGGTG AGGGCAGCCT CGCCGACTTG
ATCGCGCTTG CGGTCCGCTA A
 
Protein sequence
MTTFFQLHVL TAYPPANLNR DDTGRPKTAR VGNVDRLRVS SQALKRAWRS SDAFAEALAG 
HLGQRTQRLG ETIEGHLIDR GADPATARTA ARAVAERFGK LKSEGDKKPT HIEQLAFISA
DERKAAFALA ERLAAGETVD VDKAPLLRRA DGAVDVAMFG RMLADSPEFN REAAVQVAHA
FTTHRAPVED DYYTAVDDLK GPQEDAGAGF VGEAGFGSGL FYLYVCIDRD LLVRNLAGDE
DLARAGLSAV VRAVTTVAPR GKQASFASRA RASFGLLERG SEMPRTLAAA FLKPVGGEDV
LETSIARLLS LRESFARAYG DEAETAIMNV PAGEGSLADL IALAVR