| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5365 |
|---|
| Symbol | |
|---|
| ID | 7301954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 5446359 |
|---|
| End bp | 5447795 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643602997 |
|---|
| Product | urate catabolism protein |
|---|
| Protein accession | YP_002500513 |
|---|
| Protein GI | 220925211 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase
[COG3195] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03164] OHCU decarboxylase
[TIGR03212] putative urate catabolism protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.805332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA CAACCTACCC GCGCGACATG ATCGGCTACG GCCGCACGCC CCCGCAGGCC
GCGTGGCCGC ACGGTGCCCG GCTCGCCGTG CAGTTCGTCA TCAACTACGA GGAGGGTGGC
GAGAACTGCC TGCTGCACGG GGACCGCGGC TCCGAGGCCT TCCTGTCCGA GATCATCGGC
GCGGCCTCCT GGCCGGGCCA GCGGCACATG AACATGGAGT CGATCTACGA ATACGGCTCC
CGCGCCGGCT TCTGGCGCCT GTGGCGACTG TTCACCGCGC GGCAGATGCC GGTGACCGTC
TTCGGCGTCG CGACCGCCCT CAAGCGCAAC CCGCAGGCCG TGGCGGCCAT GCGGGAGGCC
GGCTGGGAGA TCGCCTCGCA CGGCCTCAAG TGGATCGACT ACAAGGATTT TTCCGCCGAG
GAAGAGCGCG CCCATATCGG CGAGGCGATC CGCCTCCACA CGGAGCTGAC GGGCGAGCGC
CCGCTCGGCT TCTACCAGGG CCGCACCTCC GAGCACACGC TGCGCCTCGT CATGGAGGAG
GGTGGCTTCC TCTACGCGGC GGATTCCTAT GCGGACGACC TGCCCTACTG GGTCGCGGGT
CCGCACGGCC CGCAGCTCAT CGTGCCCTAC ACGCTCGATG CCAACGACAT GCGCTTCGCG
ACCGCGCAGG GCTTCAACAG CGGCGACCAG TTCTTCACCT ACCTGAAGGA TACGTTCGAC
CTGCTCTACG CCGAGGGCGC CGAGACCCCG AAGATGATGT CGGTGGGCCT GCATTGCCGC
CTCGTCGGGC GTCCGGGCCG TGCGGCGGCG CTCGCCCGCT TCCTCGACTA CGTGGCGGAG
CATCCCGGCG TCTGGGTGGC GCGGCGCCTC GACATCGCCC GGCACTGGAT CCGCCAGCAC
GCGCCCCGCG ACCTGACGCC CAGCACCATG AGCCCGGCGC TCTTCGTCGA GTCCTTCGGC
GACGTGTTCG AGCACGCGCC CTGGGTCGCC GAACGGGCGC TCGCGGGCGG GATCGGCCCT
GCCCAGGACA GTGCGGATGG CCTGCACGCC GCCATGGTCG CCGCCCTGCG GGCCGCCGAC
CCGGACCGGC TCCTCGCCCT GATCCGCAAC CATCCGGATC TCGGCGACCG GGTCGCGGCG
CTGACGCCGG ATTCCGCCGC CGAGCAGGCG AGCGCCGGGC TCGACGCCCT CGACGAGGCG
CAGCGCGACC GCTTCCTCGA CCTCAACGCC CGCTACCGCG CCCGCTTCGG CTTCCCCTTT
GTGATGGCGG TGCGGGGCCG CACGGCGGAC GAGATCCTGG CCGCCCTGGA GGAACGGCTC
GCGCACGACC CGGAGAGCGA ACGGGAGACG GCTCTCGCGG AGATCGAGCG GATCGCGCTC
CTGCGCCTGC GCCAGCGCCT TCCCTCGCTG CCGGACGTCT TCACCCCCCC GGCGTGA
|
|---|
| Protein sequence | MAETTYPRDM IGYGRTPPQA AWPHGARLAV QFVINYEEGG ENCLLHGDRG SEAFLSEIIG
AASWPGQRHM NMESIYEYGS RAGFWRLWRL FTARQMPVTV FGVATALKRN PQAVAAMREA
GWEIASHGLK WIDYKDFSAE EERAHIGEAI RLHTELTGER PLGFYQGRTS EHTLRLVMEE
GGFLYAADSY ADDLPYWVAG PHGPQLIVPY TLDANDMRFA TAQGFNSGDQ FFTYLKDTFD
LLYAEGAETP KMMSVGLHCR LVGRPGRAAA LARFLDYVAE HPGVWVARRL DIARHWIRQH
APRDLTPSTM SPALFVESFG DVFEHAPWVA ERALAGGIGP AQDSADGLHA AMVAALRAAD
PDRLLALIRN HPDLGDRVAA LTPDSAAEQA SAGLDALDEA QRDRFLDLNA RYRARFGFPF
VMAVRGRTAD EILAALEERL AHDPESERET ALAEIERIAL LRLRQRLPSL PDVFTPPA
|
|---|
| |