Gene Mnod_5341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5341 
Symbol 
ID7301930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5418247 
End bp5418750 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content74% 
IMG OID643602973 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002500489 
Protein GI220925187 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.441473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAAT CCTCGTCCAG GGCCCGCACG GCCCGGCCCG AGACCGAGAT GCCCGAGGCC 
CGTCCGGCCT TGGCGCCGCC GCGTCTCGCC CTCGCGGTGG CGGCGGTGAT CGACATCGCG
CTCCACGCGC GGCCCCAGCC CGTGAGCGCC AAGGCGCTGG CCGCGCGCCA CGGATTGCCT
CCGCGCCACC TCGAGACCGT GCTGCAGGCG CTGGTGCGCC ACGGATTGCT GAAAGGTCTG
CGCGGCCCGC ATGGCGGGTA CGAACTCGCC CGCGAGCGGC GGCGCATCAG CGCGGGCGAC
GTCGCCCGGG CCGTGCTGAG CCTCGAAGGC CCGGAGCCGG ACAAGCCCGC CGTCGCGGCG
GCCCTCGTCG ATCCGTTGCT CGCCGCGGCG GGGCAGGCCT TTCTCGCCAC CCTCGATGCC
GTCACTGTGG AGGATCTGTG CCGTCAGGCC GAAGCGGCCC GGATCTTCCC GCATGATCCG
CGGGCCGGAG ACTTCGCGAT CTGA
 
Protein sequence
MAQSSSRART ARPETEMPEA RPALAPPRLA LAVAAVIDIA LHARPQPVSA KALAARHGLP 
PRHLETVLQA LVRHGLLKGL RGPHGGYELA RERRRISAGD VARAVLSLEG PEPDKPAVAA
ALVDPLLAAA GQAFLATLDA VTVEDLCRQA EAARIFPHDP RAGDFAI