| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5269 |
|---|
| Symbol | glgA |
|---|
| ID | 7304250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 5345384 |
|---|
| End bp | 5346925 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643602900 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_002500418 |
|---|
| Protein GI | 220925116 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGGT CGGCGTGCGT GCGCTCCGTG TCTTCTGCGT CCGTTGCGCC CCCCGATCCC
CCCGGCCGTC GCCGCGCGGA CACCTCCCAC GGCTCGCTGC GCCAGCGCAT CCTGTTCGCC
ACGCCGGAAA TGGCGGATTT CCTCAAGACC GGCGGCCTCG GCGAGGTCGC AGCGGCGCTG
CCCCGGGCCC TGCGGCAGCA TTACGACGTG CGCATCCTGA TCCCGGGCTA CCGCCAGGTC
ATCGAGCGCT ACGCCGAGAT TTCGGTCGTC GCCCAGCTTC CCGGTCGGGA CGGGCTGCCG
GCCTGCGACC TCGGCCTCGT CGAGACCGGC GACGGGCTGC CGGTCTACGT GCTCCTCGAT
GCCGAGCTCT ATGACCGCGC CGGCTCGCCC TACGGCGACC AGGGCGGCGA CTTCCCGGAC
AACGATCTGC GTTTCGCACG CCTCAGCCTC GCCGCCGTGG AACTCGCGAA GGGCGCCGAT
CCGGACTGGA CGGCCGACCT CCTGCACCTG AACGACTGGC AGACGGCTCT CGCCCCCGCC
TATCTGGCCT GGCAGGGCCT GCGGGTGCCG AGCATCCTCA CCGTCCACAA CCTCGCCTAC
CAGGGCCTGT TCCCGCGCGA GAATCTCGGC CGTCTCGGCG TCCCGGAAGG CGCCTTCCAG
ATCGACGGCG TCGAGTTCTA CGGCAAGCTC TCCTTCCTCA AGGCGGGCCT GTTCTACGCG
TCGCACGTCA CCACCGTGAG CGAGACCTAC GCGCACGAGA TCACCTCGCC GGAATTCGGC
TGCGGCCTCG ACGGGCTCCT GCGCACCCGC GCCCGGCAGG GCCGGCTCGC CGGCATCCTC
AACGGCATTG ACGAGACCTG GGACCCGCGG ACGGACCCGC ACCTCGCCAC GGCCTTCGAG
CCCGACGACT GGAAGGGCAA GCGCGCCAAC GCGGATGCGG TGCGCGAGCG CTTCGGCCTC
GGCGTCTCCC GCGGCCCGCT CTTCGCGATC GTGTCGCGGC TCGTCCACCA GAAGGGCGTC
GACCTGACCC TCGCGGCGGC GGAATCGATC GTGGCGGAGG GAGGCCAGCT CGTCGTCACC
GGCCAGGGCG AGCCGCGCTT CGAGAACGCC TTCCTCGATC TCGCCCGGCG GCATCCCGGC
GCGGTCGGCG TGCGGATCGG TTTCGACGAG ACCGATGCGC ACCGGATGTT CGCGGGCAGC
GACTTCCTGC TGATGCCGTC GCGCTTCGAG CCCTGTGGCC TCGCGCAGAT GTATGCCCAG
CGCTTCGGCT CCCTGCCGAT CGCTCACCGC ACCGGCGGGC TCGCCGACAC GGTGGAGGAC
GGCGTCACCG GGTTCCTGTT CGGGGAGGCG TCGCTCAAGG GCCTGACCAG CGCCATTCGC
CGCGCCCTCG ACACCTTCGC GTCGAAGCGC CACCTCAACA CCATGCGCCG CACCGCCATG
ACCCGCAGCT TCGGCTGGGA CAAGGCGGCG CTCAGCTACA GCGCGCTCTA TGCCCGGACG
ATGGGCAACG GCGCCGAGCT GCTGCGCTCG CGGGCGGCGT GA
|
|---|
| Protein sequence | MMGSACVRSV SSASVAPPDP PGRRRADTSH GSLRQRILFA TPEMADFLKT GGLGEVAAAL
PRALRQHYDV RILIPGYRQV IERYAEISVV AQLPGRDGLP ACDLGLVETG DGLPVYVLLD
AELYDRAGSP YGDQGGDFPD NDLRFARLSL AAVELAKGAD PDWTADLLHL NDWQTALAPA
YLAWQGLRVP SILTVHNLAY QGLFPRENLG RLGVPEGAFQ IDGVEFYGKL SFLKAGLFYA
SHVTTVSETY AHEITSPEFG CGLDGLLRTR ARQGRLAGIL NGIDETWDPR TDPHLATAFE
PDDWKGKRAN ADAVRERFGL GVSRGPLFAI VSRLVHQKGV DLTLAAAESI VAEGGQLVVT
GQGEPRFENA FLDLARRHPG AVGVRIGFDE TDAHRMFAGS DFLLMPSRFE PCGLAQMYAQ
RFGSLPIAHR TGGLADTVED GVTGFLFGEA SLKGLTSAIR RALDTFASKR HLNTMRRTAM
TRSFGWDKAA LSYSALYART MGNGAELLRS RAA
|
|---|
| |