| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5250 |
|---|
| Symbol | |
|---|
| ID | 7306676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 5321617 |
|---|
| End bp | 5322558 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643602881 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002500399 |
|---|
| Protein GI | 220925097 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.923555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTG CCGGCCTGTC CCTTCGCGAT CTCGAATATG TCGTTGCCGT CGCTGACGAA
AACCACTTCG GGCGGGCGGC CGAGCGCTGC AATGTCAGCC AGCCGACGCT CAGCGTTCAG
GTGCGCAAGC TGGAGGAGGC GCTCGGGCTG ACGATCTTCG AGCGCACGAA CCGGCGGGTG
CTGCTGACCC CGGGCGGCCA GGTTTTGGTG CGGCAGGCCC GGGCCGTGCT GGCCGAGGCG
CACCGCCTGC TGCTTCTGGC CCGCGAGGGC CACGGCGCCC CCCTCGCCGG CCGGCTGGTG
CTCGCGGCGA TCCAGACCCT CGGCCCCTAT CTCTTCCCTC TGGTGCTGCG CCAGCTGCGC
CAGGACTTCC CGCAACTCGC GCTCGCGCTC AGCGAGGGGC GCACCGCCGA GATCCTGGAG
GGGCTACGCG AGGGCCGGCT CGACGCCGCC CTCGTCTCGC TGCCGATCGC CGAGGCGGGA
CTGACCGTGG TGCCGCTGTT CCGCGAGCCG TTCCTGCTCG CCTGTCCGGC CGATCACGCC
TTCGCGGTCG GGGATGCGCC GCAGGCCGCC GACCTCGCCG GGCGTGACCT GCTCCTCCTC
GACGAGGGCA ACTGCCTGCG CGATCAGGCG GTGGCGGCCT GCGGGGCCGG CCCGGGGGCG
GGGCGGCACG CCACCAGCCT GGAGACCCTG CGCTCCATGG TGGCGGCGGG CGCCGGCTAC
ACGCTCCTGC CGGCGCTCGC CGTGCCGAGC GGCCCGGATC CGAGCGGCCT CACGGTCTGC
CGGCACTTCG CCGAGGGCGG CCCCGACCGC GTGATCGCCC TCGCATGGCG CTCCAGCGAT
CCGCGCGGCG AGGGGCTGGG GCGGCTCGCG ACGTTCTTCC GGGCGCATGC ACCGGGTGCA
ACGCTTGCCT GCAGCGACGC GGAGGCGCCC GGTTCGGCAT GA
|
|---|
| Protein sequence | MNLAGLSLRD LEYVVAVADE NHFGRAAERC NVSQPTLSVQ VRKLEEALGL TIFERTNRRV
LLTPGGQVLV RQARAVLAEA HRLLLLAREG HGAPLAGRLV LAAIQTLGPY LFPLVLRQLR
QDFPQLALAL SEGRTAEILE GLREGRLDAA LVSLPIAEAG LTVVPLFREP FLLACPADHA
FAVGDAPQAA DLAGRDLLLL DEGNCLRDQA VAACGAGPGA GRHATSLETL RSMVAAGAGY
TLLPALAVPS GPDPSGLTVC RHFAEGGPDR VIALAWRSSD PRGEGLGRLA TFFRAHAPGA
TLACSDAEAP GSA
|
|---|
| |