| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5245 |
|---|
| Symbol | |
|---|
| ID | 7306671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 5316759 |
|---|
| End bp | 5317739 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643602876 |
|---|
| Product | transposase IS111A/IS1328/IS1533 |
|---|
| Protein accession | YP_002500394 |
|---|
| Protein GI | 220925092 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.39153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGCA AGGAAGTGTC CAAACAAGAG ACCGCGGGCA AGTCTAGCGT GGGGATCGAC
GTCAGCAAGA GCTGGCTCGA CGTCCACGTC CTCCCCTCCG GCCAAGCCCA GCGGTTCGCC
AATACCGAGG TCGGCATCCG GCAGCTCAAG CGCTGGCTTG GGCGCTTTGC TCTGGGGCTG
GTCGTGGTCG AGGCCACCGG CAAGTGGCAC CGCCAGACCC GCCGCAGCCT GCATGCCTCG
GGCCTGCCGG TCGCCGTCGT CGATCCGTTT CGGGTGCGCA TGTTCGCCAA GGCGCAAGGC
ATCTGGGCCA AGACCGATCG GCTCGATGCC CGCGTGCTGG CGCAGTTTGC CGCGGTGATG
GCCCCCCCGC AGCGCCCGCC GGCCTCGGAC GCGCTCGAAG CGCTCCAGGA ACTGGTCGCG
GCCCGCGACA GCGCCGTGGC CGAACAAACC GCCCTCAAGA ACCAGCTGGC CGCGGCCGCA
AGCCCGTTCC TGATCCGCCA GCTCCAGGAC CGTCTGGCCA GGATCGCCGC GGACATCGAG
GCCCTTGCCG GCGAGATCCG CCGGCTCATC GCGGCCGATC CCGGACTGGC CCGGCGGCAT
GCCATCCTGG TCTCGATCCC CTCGATCGGG GACACGATCG CGGCCACCCT GGTGGCCAGC
CTGGCCGAGC TGGGCACCTG CAGCAGCCGG CAGATCGGCC TGCTGGCGGG CCTGGCGCCG
GTCGCCGACG ATTCCGGCGC GCGCCAGGGC GTGCGGGTCA TCTGGGGCGG CCGCCCGCCC
GTGCGCCGCG TCCTCTACCT CGCGGCGCTC TCGGCCGCCC GCCACAACGC CGGCCTGAAA
GCCTTCCACG AACGCCTGAT CGCCAACGGC AAGAAGCCAA AGTGCGCCAT CATCGCCGTG
GCCCGCAAGC TCGCCGTGCT GGCCAACAGC CTCATCGCTC AGGACCGCCT CTGGACGCCA
AATCAGCCCC AACAGGCTTG A
|
|---|
| Protein sequence | MQGKEVSKQE TAGKSSVGID VSKSWLDVHV LPSGQAQRFA NTEVGIRQLK RWLGRFALGL
VVVEATGKWH RQTRRSLHAS GLPVAVVDPF RVRMFAKAQG IWAKTDRLDA RVLAQFAAVM
APPQRPPASD ALEALQELVA ARDSAVAEQT ALKNQLAAAA SPFLIRQLQD RLARIAADIE
ALAGEIRRLI AADPGLARRH AILVSIPSIG DTIAATLVAS LAELGTCSSR QIGLLAGLAP
VADDSGARQG VRVIWGGRPP VRRVLYLAAL SAARHNAGLK AFHERLIANG KKPKCAIIAV
ARKLAVLANS LIAQDRLWTP NQPQQA
|
|---|
| |