| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5151 |
|---|
| Symbol | |
|---|
| ID | 7302329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 5210957 |
|---|
| End bp | 5212114 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643602782 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002500300 |
|---|
| Protein GI | 220924998 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.206378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCATC GCCGCCTCGC TCTCGCCGCC TTCGCCGCCC TCGCGCTCGC CGCCTGCAAG
CCCACTCAGC AGAGTGCCGC GCCGGCCGAG ACCCTGCCGA CGGAAGTCAG CATCGTGACG
GTCCGCAACC AGCCGATTCC GTTCGAGCGC GAACTGCCCG GCCGCGTCGC CCCGACCCGC
ATCGCCGAGG TCCGCGCGCG GGTGTCGGGC CTCGTCGTCA AGCGGGCCTT CCAGCAGGGC
AGCCAGGTCA AGGAGGGCGA CCTCCTCTAC AAGATCGACC CGGCGCCCTA TCGGGTCGAG
CTCGACAGCG TCGAGGCGAC GCTCGCCCGC GCCGAGGCCG CCCTGGTCCT CGCCCGCCAG
CAGGCCGAGC GCCTCGAAAC CCTGCTCGCC CGCCAGACCG CGAGCCAGGC GCAGTACGAC
GCCGCCTACG CCGCCCAGAA ACAGGCCGAG GCCGAGGTGG CGGGGGCCAG GGCGGCCCGC
GACCGCGCCC GGCTGAACCT GAGCTACACG GATGTGCGCG CGCCGATCTC GGGCCGCATC
GGCCGCGCCC TCGTCACCGA GGGCGCCCTC ATCGAGCAGG GCAGCGCCAC CAACCTGGCG
ACGATCCAGC AGCTCGACCC GATCTACGTC GACATCACCC AGTCGGTGAG CGAGCTCAAC
AAGCTGCGCC GCGATCTCGC GAGCGGCGAA CTGGCGAGCA TCGCCCCCGA CACCGCTAGC
GTGCGGCTCA TCATGGATGA CGGCTCGCTC TATTCCGAGC CCGGCCGCCT GCTCTTCTCC
GACGTGACGG CCGATCCGAG CACCGGCCAG GTGACGCTGC GCGTCGAGAT CCCGAACCCG
CACAACGAGC TGTTTCCGGG CATGTACGTC CGGGCGCGCA TCCGCCAGGG CATCGACGCG
GACGCGATCG CCGTCCCTCA GCAGGCCGTC CACCGCTCCA ATGACGGGCG GGCGGAAGTC
TGGCTCGTCG GCGAGGGCGA CAAGGTCATG CTCCACCCGG TCGAGGTCGG CCCGGTGGTC
GAGGGCCAGT GGGTGATCCG CGACGGCCTC AAGGCCGGCG ACCGGGTCGT CACCGAGGGC
TTCCAGAAGA TCGTCGCCGG TACGGTGGTG AAGACCGTGC CCTGGCAGAC GGCCGCGGCC
GGCACCGACC GTCGCTGA
|
|---|
| Protein sequence | MTHRRLALAA FAALALAACK PTQQSAAPAE TLPTEVSIVT VRNQPIPFER ELPGRVAPTR
IAEVRARVSG LVVKRAFQQG SQVKEGDLLY KIDPAPYRVE LDSVEATLAR AEAALVLARQ
QAERLETLLA RQTASQAQYD AAYAAQKQAE AEVAGARAAR DRARLNLSYT DVRAPISGRI
GRALVTEGAL IEQGSATNLA TIQQLDPIYV DITQSVSELN KLRRDLASGE LASIAPDTAS
VRLIMDDGSL YSEPGRLLFS DVTADPSTGQ VTLRVEIPNP HNELFPGMYV RARIRQGIDA
DAIAVPQQAV HRSNDGRAEV WLVGEGDKVM LHPVEVGPVV EGQWVIRDGL KAGDRVVTEG
FQKIVAGTVV KTVPWQTAAA GTDRR
|
|---|
| |