| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5136 |
|---|
| Symbol | |
|---|
| ID | 7302314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 5197221 |
|---|
| End bp | 5198096 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643602767 |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_002500285 |
|---|
| Protein GI | 220924983 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGCA CCATCCTCCT CTGCCTGCTC CTCCTCGCCC TCTGCCCGCG CCTAGCCGGC
GTGCAGCCTG CCGGCGCGCA AGCCGCGGGC GCCGCCACCG AGACCGTCGA GCAGGCGCTC
TGCCGCCTGA TCGAGGGCGC CGCGCAGGCG CAATCCCTTC CCGTCGCCTT CCTGACCCGG
CTGATCTGGC GCGAGAGCAG CTTCCGCCCG CGCGTGGTGA GCCCGGCGGG AGCGCAGGGC
ATCGCGCAGT TCATGCCGGG CACCGCCGCC GAGCGGGGTC TCGCCGATCC CTTCGATCCC
GAACAGGCGA TCCCGCATGC GGCGCGGCTC CTCACCGATC TGCGGCGGCG CTTCGGCAAT
CTCGGCCTCG CGGCGGCGGC CTATAACGGC GGGCCGGGGC GGGTCTCGGC TTGGCTTGCG
GGCGGCGGCG GGCTGCCGGC CGAGACGCGA GCCTACGTCG CCGCGATCAC GGGCCGCCCG
GCGGAGGATT GGGCCGCCGA GGCCAAGGGC GACCATAAGG GCGACCTGAT CGAGCCGCCC
GGCACGCGCT GCCTGCAGGT GACGGCGGCT TTGCGCGTGC GGGGCCGCAA CGAGACCTAT
TTCGCCGACA GCACGCCGTC CCTGGCGCCC TGGGGCATCC AGCTTGCCGG AAACTTCTCC
AAGGCCGCTG CGCTTGCCGC CTTCGGCCGC GCCCGCGACC GCTATGCGTC GATCCTGGGC
GACGTGCGCC CGATGATCAT CGGCACCCGC TTCCGCAGCC GAGGCACCCG GGCCTTCTAC
CGGGTGCGCG TGCCCTCCGA GACCCGGGAC GCCGCCGAGG CGCTGTGCAA CCGCATCCGC
GGCATCGGCG GCGCCTGCCT GGTGCTCAAG ACGTAA
|
|---|
| Protein sequence | MTRTILLCLL LLALCPRLAG VQPAGAQAAG AATETVEQAL CRLIEGAAQA QSLPVAFLTR
LIWRESSFRP RVVSPAGAQG IAQFMPGTAA ERGLADPFDP EQAIPHAARL LTDLRRRFGN
LGLAAAAYNG GPGRVSAWLA GGGGLPAETR AYVAAITGRP AEDWAAEAKG DHKGDLIEPP
GTRCLQVTAA LRVRGRNETY FADSTPSLAP WGIQLAGNFS KAAALAAFGR ARDRYASILG
DVRPMIIGTR FRSRGTRAFY RVRVPSETRD AAEALCNRIR GIGGACLVLK T
|
|---|
| |