Gene Mnod_5117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5117 
Symbol 
ID7302295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5177390 
End bp5178604 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content69% 
IMG OID643602748 
Productputative UreA/short-chain amide ABC transporter 
Protein accessionYP_002500266 
Protein GI220924964 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGACAA CGCTCCTGGC CGCGGCGTGC ATCGCCGCGT GGCACGGTTC CGCTTGCGCG 
CAGCCGGCGA AGACGGTCTC CGACGGCGTG GTGCGCATCG GCTTCCTTCT CGACATGTCG
AGCGTCTACG CCGACGTCAC CGGCCCCGGC AGCGCCGCGG CGGCGCGCAT GGCGGTGGAG
GATTTCGGCG GCACGGTGCT CGGAGCGCCG ATCGAGGTCG TGATCGCCGA TCATCAGAAC
AAGCCCGACA TCGCGGCCGC GACCGCGCGG GCATGGTTCG ACACCGACCG GGTCGATGCG
ATCCTCGACG TCGCCGCCTC CGCCACCGCC CTCGCCGCCG CCGACATCGC CAGGGCCAAG
CACAGGATCA TCGCCTTCAA CGGCCCGGGC GCCGTGCGGC TCACCAACGA GGCCTGCTCG
CCCGTCTCGA TCCACTGGGC CTACGACACC TATGCCCTCG CCAATGTCAC CGCCCAGGCG
ACCGTGAAGC GGGGCGGCGA TTCCTGGTTC TTCCTCACTG CCGACTACGC CTTCGGGCAC
GATCTGGAGC GGGATGCGAG TGCCGTCGTC AGGGCGAGCG GGGGCAGCGT GAAGGGCAGC
GTGCGCGCCC CCCTCAACAC GCCGGATTTC TCATCCTTCC TGCTGCAGGC GCAGGGCTCG
GGCGCCAAGG TGGTCGGCCT CGCCAATGCG GGCCGCGACA CCACCACCGC CATCAAGCAG
GCCGCCGAGT TCGGCCTCGC CCAGGGCGGC CAGACGCTCG CCGGGCTCCT CGTCTACATC
AACGACGTCC ACAGCCTCGG CCTGAAGCCG ACCCAGGGCA TGCTGCTGAC CGAAGGCTTC
TACTGGGATC TCGACGACGC CACCCGGGCT TGGTCGAAGC GCTTCTTCGA GCGGACCGGA
CGGATGCCGA ACATGTCCCA GGCCGGCGTC TACTCGACCG TCACGCATTA TCTAAAGGCC
GTCGCCAAGG CCGGCACAGA CGACACCGAC GCCGTGATGA AGGTAATGCG CGAGACGCCG
GTCGACGACT TCTACGCCAA GGGCGGGCGC ATCCGGGAGG ATGGCCGCAT GGTGCACGAC
ATGTACCTGT TCGAGGTGAA GCGGCCCGAG GAATCGACGG GCGAGTGGGA CCTCTACAAG
CGGGTCGCCA CGATTCCCGG CGACCAGGCC TTCCAGCCGC TCTCGGCCTC CCGCTGCCCT
CTGGTGAAGA AATGA
 
Protein sequence
MRTTLLAAAC IAAWHGSACA QPAKTVSDGV VRIGFLLDMS SVYADVTGPG SAAAARMAVE 
DFGGTVLGAP IEVVIADHQN KPDIAAATAR AWFDTDRVDA ILDVAASATA LAAADIARAK
HRIIAFNGPG AVRLTNEACS PVSIHWAYDT YALANVTAQA TVKRGGDSWF FLTADYAFGH
DLERDASAVV RASGGSVKGS VRAPLNTPDF SSFLLQAQGS GAKVVGLANA GRDTTTAIKQ
AAEFGLAQGG QTLAGLLVYI NDVHSLGLKP TQGMLLTEGF YWDLDDATRA WSKRFFERTG
RMPNMSQAGV YSTVTHYLKA VAKAGTDDTD AVMKVMRETP VDDFYAKGGR IREDGRMVHD
MYLFEVKRPE ESTGEWDLYK RVATIPGDQA FQPLSASRCP LVKK