Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_4556 |
Symbol | |
ID | 7303652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 4610703 |
End bp | 4613354 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643602200 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002499726 |
Protein GI | 220924424 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0198839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTTGC GCCGATGGAT CGCCGCCCTG ATGACCGCCG CCGTGCTGGC GCCGGGCCTC GCGGCCGCGC AAGGCCCCGC GGCGAAACCG GATGCCAAGG CGCAGGCGCC GCAAGCCACG CAAGCGCCGC AGGCCACGCA AGCCGCGCCG CCGGCGCAGG CTGCGCCGCA GACCGCCCCG CCGGCCGCCC CGGCGCCGAA GCCGCCGCCG ACCCCGATCT CCGAGCAGAT CAAGCAGATC CGCGCCCAGC TCGACCAGGA GAAGGCGGAT CTCGATCAGC GCGAGCAGGC GCTGACCCAC CACGACCTCA ACAAGGACGA TCTCGCTCTC CTGCGCGACG GCATCGATCC GGTGGCCGAG CGGCTGCGCC ACGTCATCGA CAACCTCGGT CCGCGGCTCG AGGCGGCCAA GGAGCGCCTG AACCAGCTCG GACCCAAGCC CAAGGAGGGC GCCGAGGCCC CGGACGTGGC CCAGGAGCGC GCCCAGCGCG AGGGCGGCGT CGCCGAGATC GACGAGACCA TGCGCCTCGC GCGCTCGCTC CTCGTCCAGA GCGAGCAGAT CACCGACCAG ATCAGCAACC GCCGCCGGGC CGCCTTCACC CGCGCCCTGT TCGAGCGCAC GGACGGGCTG GTGAGCCCGA ACCTCTACGC GCGGGCGGCC ACGAGCCTGC CGCGCGACCT CAAGGCGGCC GAGACCGCAC TCGACGACAT CGTCGGCCAG CTGGGGCGCA ACGGCACGCC GCTGCGTCTC CTCGTGGTCG CGCTCGCCAT CGGCGTCTCG GTGGCGCTCT ACATCGCCCG GCGCCACATC GCCCCGCGGC TCGGGCGGCG CGACGCCGCC AAGGAGACCG CCAAAGCGCC CTCGCGCCGG GCGAAGGTGC TGGCCGCCTG GCGCGTCGTG CTGGCGGGCG CCGTGCCTGC GGTGGCCGGC AGCTTCGTGG TGAGCTTCGC CATCACGGCG ACGGACCTCG TGCCGGACCG GTTCTCCACC GTGGCGCACG GGATTCTGAT GGCCCTGGCC TTCGTGGCCG TGGTCGAGGC GGTGACGGAT GCGCTCCTGT CGCCCGGCAA GCCCGACTGG CGCCTCGTCG CCATGGAGGA CGCGACGGCC GAGCGCCTGA CCCGCCTCGT GGTCGGGATC GCCTTCGTCA TCGCCATCGG GCGCACGATC GAGGAGTTCA ACGAGGCGAT CGCGGTCGGC CTGCCGGTCA GCATCATCAC GCGCGGCATC TTCGCGGCGG TGGTCACAGT GGTGATGGCG GAGGGCCTGC GCCGCTTCGC CGCCCGGGCC GAGACCGACG AGGCCTGCCT CGGCCCCTAC GTGGCGGCGG AATCGAGCAC CAGCATCGGC GGCCCGCTGC GGATCGTCGG CTGGATCGTG ACCGCGGCGG TGGGCCTCTG CGCGCTCTCC GGCTACATCG CGCTCTCCTC CTTCCTGATC GACCAGCTGG TCTGGACCGC CATCGCGGTG GCGCTGCTCT ATCTCGCCAT CACCAGCGCC GATGCCTTCA TCGGCGGCAC GCTGCAGAAC GATTCGCGGA TCGCCACCGC CCTCCAGGCC AATACCGGCC TGCGCAAGAA GTCCCTGAAT CAGATCGCCG TCCTGATGGG CGGCCTCGTG CGCGTCGTGC TGGTCACGGT CGCGGCGGTG CTGCTGCTGG CGACCTGGGG CGTCGACTCG ACCGACATCT ACGCCTCCTT CCGGGCGGCC TTCTTCGGCT TCAAGGTCGG CGACGTCACG ATCTCGCTCT CGACCATCGT CATCGCGCTC GGGCTGTTCA TCCTCGGCCT CGCCATCTCG CGGGTGGTCA AGCGCTGGCT GGAGAACACC TACCTGCCGG CCACCGATCT CGAAGCCGGC CTGCGCAACT CGATCGCGAC CATCACGGGC TATATCGGCT TCCTGGTCTC GCTCACGGTC GCCTTCTCGT ATCTGGGCCT CAGCCTGGAG AAGATCACGA TCGTCGCCGG CGCGCTCTCG GTCGGTATCG GTTTCGGCCT GCAATCGATC GTCAACAACT TCGTCTCGGG CCTGCTGCTC CTGTGGGAGC GGCCGATCCG GGTCGGCGAC CTCGTGGTGA TCGGCGACAA CGAGGGCTAT GTGCGGCGCA TCAGCGTGCG CTCGACGGAG ATCCAGACCT TCGACCGCTC GGCCGTGATC GTGCCGAATT CCAACCTGAT CTCCGGCGTG GTGAAGAACC GGGTGCGCGG CGACCGCACC GGCCGCGTCT CGATCACCGT GAACGTGCTG CGCAACCAGG ACCCGGTGCG CGCCGCCGAG CTGATCGTCG GCTGCGCCAA GGCCCATTCC GACGTGCTGA AGGAGCCGCC GCCCCGCGTG GTGTTCCGCA AGATCGGCGA TCCCTTCCTC GAATTCGAGC TGATCGCCAT GATCACGGAT GTCGCCTCGC AGCTGAAGGT GCAGAGCGAC CTCAACTTCG CGGTGTTCAA GACCTTGTCG GACGAGGGGC TCATCCCCAA TCTCGGGCCC GGGGCGAGCA TCGTCACCGT GCAGGGGCTG GAGCCGGTTC AGGACGCGTT GGGGCAGATC GCCCGGGCGG TGGTGCCCGC GGTGGCTCCC CCGGCCGATC CGGTTACGCG GTCCCCGGCG GGCGGGGGCG AGCGCCGCCG AACGCCCGAG TCCGTGCCGT GA
|
Protein sequence | MTLRRWIAAL MTAAVLAPGL AAAQGPAAKP DAKAQAPQAT QAPQATQAAP PAQAAPQTAP PAAPAPKPPP TPISEQIKQI RAQLDQEKAD LDQREQALTH HDLNKDDLAL LRDGIDPVAE RLRHVIDNLG PRLEAAKERL NQLGPKPKEG AEAPDVAQER AQREGGVAEI DETMRLARSL LVQSEQITDQ ISNRRRAAFT RALFERTDGL VSPNLYARAA TSLPRDLKAA ETALDDIVGQ LGRNGTPLRL LVVALAIGVS VALYIARRHI APRLGRRDAA KETAKAPSRR AKVLAAWRVV LAGAVPAVAG SFVVSFAITA TDLVPDRFST VAHGILMALA FVAVVEAVTD ALLSPGKPDW RLVAMEDATA ERLTRLVVGI AFVIAIGRTI EEFNEAIAVG LPVSIITRGI FAAVVTVVMA EGLRRFAARA ETDEACLGPY VAAESSTSIG GPLRIVGWIV TAAVGLCALS GYIALSSFLI DQLVWTAIAV ALLYLAITSA DAFIGGTLQN DSRIATALQA NTGLRKKSLN QIAVLMGGLV RVVLVTVAAV LLLATWGVDS TDIYASFRAA FFGFKVGDVT ISLSTIVIAL GLFILGLAIS RVVKRWLENT YLPATDLEAG LRNSIATITG YIGFLVSLTV AFSYLGLSLE KITIVAGALS VGIGFGLQSI VNNFVSGLLL LWERPIRVGD LVVIGDNEGY VRRISVRSTE IQTFDRSAVI VPNSNLISGV VKNRVRGDRT GRVSITVNVL RNQDPVRAAE LIVGCAKAHS DVLKEPPPRV VFRKIGDPFL EFELIAMITD VASQLKVQSD LNFAVFKTLS DEGLIPNLGP GASIVTVQGL EPVQDALGQI ARAVVPAVAP PADPVTRSPA GGGERRRTPE SVP
|
| |