Gene Mnod_4553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_4553 
Symbol 
ID7303649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4608469 
End bp4609236 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content73% 
IMG OID643602197 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002499723 
Protein GI220924421 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.201856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGTC TCTCCGGGAA GGTCGCCCTG ATCAGCGGCG GCGCGCGCGG GATCGGCCTC 
GCCACGGCGC GGCGCTTCGC CGAGGAGGGG GCGGCCGCGG TGATCCTCGG GGATATCGAC
GCGGAGGCCG GCGCGCGGGC CGCCGCCACG CATCCGGCCT TCCACTTCGC CGCCCTCGAC
GTGACCCGCG ACGAGGCGTG GCAGGAGGTG GCGGACGAGG CCGTGCGGCG CCACGGCGGC
CTCGACGTCG TGGTCAACAG CGCCGGCATC GCCGTGGTGG CGACGATCGA ATCCGTCACC
CTCGCGCAGT GGCGCCGGGT GCAGGACGTC AATGTGGACG GGACCTTCCT CGGCTGCCGG
CATGCCGTGC GGGTGATGAA GCCGCCGCAG GGCCGCGGCG GCGCGATCAT CAATCTCTCG
TCGGTGTCCG GAATCGTCGG CGGTCACAAT CTGGCGGCTT ATAACGCGTC GAAGGGCGCG
GTGCGGCTGC TGACGAAATC GGTGGCGCTC CACTGCGCCC GGCAGGGCTA CGGGATCCGC
TGCAACTCGA TCCATCCGGG CTTCACCGAG ACGGACATGC TGTACGACCT CGCGGCGGGC
GGGCGCGACC CCGAGGCCCT GCGCGAGCGC CTGCGGGCCT CGGTGCCGCT CGGGCGCAAT
GCGCGGGCCG ACGAGATCGC CGCGATGGCG GCCTACCTCG CGGCCGACGA GTCGAGCTTC
GTCACGGGGG CCGAGTTCGT GATCGACGGC GGGGTCACGG CGCAGTAG
 
Protein sequence
MQRLSGKVAL ISGGARGIGL ATARRFAEEG AAAVILGDID AEAGARAAAT HPAFHFAALD 
VTRDEAWQEV ADEAVRRHGG LDVVVNSAGI AVVATIESVT LAQWRRVQDV NVDGTFLGCR
HAVRVMKPPQ GRGGAIINLS SVSGIVGGHN LAAYNASKGA VRLLTKSVAL HCARQGYGIR
CNSIHPGFTE TDMLYDLAAG GRDPEALRER LRASVPLGRN ARADEIAAMA AYLAADESSF
VTGAEFVIDG GVTAQ