| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_4088 |
|---|
| Symbol | |
|---|
| ID | 7303465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 4153542 |
|---|
| End bp | 4156454 |
|---|
| Gene Length | 2913 bp |
|---|
| Protein Length | 970 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643601740 |
|---|
| Product | Bifunctional DNA primase/polymerase |
|---|
| Protein accession | YP_002499270 |
|---|
| Protein GI | 220923968 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5519] Superfamily II helicase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC CGACCGACAA TCCCCTGCTG CTCGCGGCGC TCGACTATGC CACCCGCGGC
TGGCCCGTGT TCCCGTGCTC GCCGACGACG AAGCAGCCGC TCACCCGCAA GGAGAGCGCG
CCCGGCGCGA AGGACGGAGG CCTCCATCTC GCCACTACCG ACGAAGACCA GATCCGGGCG
TGGTGGACGA AGCACCCGCG CGCCATGATC GGGATCCCGA CCGGCGCGCG CACCGGCAAC
GTGCTCGACC TCGACCTCGG CGACCCGGCC GTGATCACGG GTGCCGCCTA CCTGGAGCGC
CTGCGCGAGC ACGTCGGCGG GATTCCGGAG ACCGCCATCG CCGAGACCGG CTCGGGCGGG
CTGCACCTGT GGTTCCGCGC CGATCCCGAT GCGCCGATCG CGAACGGCGC GAACATCTGC
CCGGCCCTCT TCATCCCGCC TACTGAGGGC GCGACGCGGG CCGATGGGCG CAAGGCCAAG
GGCGCCGCGA TCGATGTGCG CGGCGAAGGC GGCTATGTGA TCGTGCCGCC TTCGGTGCGC
GAGGACGGCC GAGCCTACAC GTGGTGCCCC GGACCCGAGG ACGGGCTGAG CCCGCCGACC
GAGGCGTTGC TGCGCCTGAT GCGCAAGGAG GAGGCCCGAG CCGCTCGCGA CGCGCAGACC
GAGGCCGCCT CGCGCGGTCC CTGGGCTCCG CGACCGGCGG ACGGCAGCGA CCCGGCCCGA
TCGCTGGCGG AGGGGGACGA GGCGGTGGTG CGCTACGGCC GCGCCGCACT CGACAAGGAG
ATCGCGGCGG TCGCAGCGGC GCCGAGCGGC GGCCGCAACA ACGCGCTCAA TGCGGCCGCG
CTCAAGCTCG GCGGCCTCGT CGCCGCGGGC GCGCTGGTCG AGAGCGAGGT GCGGGAGGCG
CTGCGGAGCG CCGCGGAGGC CTGCGGCCTG GTCGGAGACG ATGGGCTGAA ATCCGTCCTC
GATACGATCG ACTCGGGGTT GCGGGCCGGA CTGCGACGCC CGCGCGACCT GTCCGAGGTG
TGGGCGCGTG CCGCCCGCGA CGAGCGGCGA CGCCAGCGCC GCGCGGGCGG GTCCGGAGCC
GATCAAGCCG ACGCAGCCGC GGACGAGAGC TGCGGCGACG CGGAGATCGA CCGCATCGCG
GCGCTCTATC CGCTGCCGCG TCTCGCCTCG CCGCCGCTGT TCTACGAGCG GCACCGCGGC
CGCGTCATGG TGCACAAGGA GGTGCCCGCG AAGCGGCGCG ACGCCGCCGC CGCCACCGTA
GCCGTGCCGG TCGCGACCCC TTTCGGGATG ACGGCGCGGA TCCGCTACCT CGACCGCGAG
GATGCCTACG GGCTGCGCAT CGCGGTCGAG GACATGAGCG GGCGGCCCCG CTACATCGAC
ATCGAGCGCG GCGACCTCGC CCGGCAGGGT GCCGGTGAAA TCCGCGCCCT CCTGTTCGCG
GCCGGGCTGC GCACCGAGGA CGACGGCGAG CACATCGCGG TGCGGGCGCT CAAGGCGGCC
GACCCGAAGG CCGAGATCCT GGTCGTGTCG CAGCCGGGCT GGCACGAACT GCCCGACCTC
GCCGATCCCT TCTTCGTCTG CCCCGGCGGC GAGGTGATCG GCACTCCCGA GGGCTCCGCC
TACGAGCTGT CCGTCTCGAC CAGGATGCCG CCGTCGGTCG CGGCTTCGGG CAGCTTGCCC
GGCTGGACGG ATGCGGTCGA GGCCGCCATC AATGTCGAAG CCTGCGAGCA CTGGACGCTC
GGGGCCTGCG CGGCGTTCGC TGGGCCGCTC GTCTCGCTGA CCGGGCTCGA CACCTGCGGC
CTGAACCTCT CCGGCTTGTC GTCGAGCGGG AAGAGCACGG CGCAGAAGAT CGCGGTCTCG
GCCTGGTCGA CGCCGGACAT CCGCAAGCCC GGCCTCGCGC AGTCCGCGAA GTCGACGGTG
AACGCCATGG AGGCGCTGGC CGCGCGCTCG AGCGGCACCG TCCTGTCCCT CGATGAGCTC
GCGCATGTCA CCGGCGCCGA GGTCGCGCGG ATGATCTACA CCTTCGCGGG TGGCGTCGGG
CGCCGACGCA TGACCGCGGA CGCCACGCTG CGCGAGAGCT ACACTTGGTC CACCTTTGCG
ATCCTGTCGG CGGAATGCTC GCTGGAGGAG AAGGTCAAGA CCGACGAGCG CGCGGAGTGG
GTCGCCGGCA TGGCGGCGCG CTTCGCGGAC GTCGACGTCA CCTCCGTCAA CCGGTCCGTC
GACCGGCCGA CGCTGGATCG CATCGCCGCC ATCGAGCGCA ACTTCGGCCA TGCGGGTCCG
GCCTTCGTGC GCGCGCTCGT CGCCGATGGC GCGCACCGAG ATCCCGTCGC TCTCCGCGAG
CGGATCATGG CCGATGTGAA GCGGATCGCC GGGACCGCAG CCGACAGCAC GCAGATGCGG
GCCGCGATTC CCTTCGCCCT TCTGCGCCGC GCTGGCGAAC TGGCGGTGAG CTACCGCCTC
CTGCCGGCCG AGACGCCGGT CGCGGCGGCG GTGGCCTGGG CGTGGAACCA ATTCATGCAC
TCGAGCGATG CGCGGGCCCT GGATCCCGAG GAGCAGGTCG TCGCCAACCT GCGCGCCTGG
GTCGTGCAAC GCTGGAACGT CACCCTGCGG GAGGTCGGCG CGAGCGGAGG GGGGCCGCGG
GAGGCGGAGG GCTGGTTCGA CGAGGACGCG GTCTACGTGC TGCGGGAGAA GCTCCGCGCA
GCCGCGGGCA ACGTCATGAC GGAAGAGGCG ACGGCCGGCG TGCTGCGCCG GAACGCGTTG
CTGTTCAAGG AGGAGAAGGA TGGCCGCCCC TATCTGCGGT ACGTCAGAGG GCTCGGCAAG
GTGCAGGCCT ACGCGCTCAA GCGCCCCGAC TTCGGTCGCG AAGTCTTCAC CAATATCGTC
GATTATCCGG GACAGGGGAG ATTCGCCTCA TGA
|
|---|
| Protein sequence | MTAPTDNPLL LAALDYATRG WPVFPCSPTT KQPLTRKESA PGAKDGGLHL ATTDEDQIRA
WWTKHPRAMI GIPTGARTGN VLDLDLGDPA VITGAAYLER LREHVGGIPE TAIAETGSGG
LHLWFRADPD APIANGANIC PALFIPPTEG ATRADGRKAK GAAIDVRGEG GYVIVPPSVR
EDGRAYTWCP GPEDGLSPPT EALLRLMRKE EARAARDAQT EAASRGPWAP RPADGSDPAR
SLAEGDEAVV RYGRAALDKE IAAVAAAPSG GRNNALNAAA LKLGGLVAAG ALVESEVREA
LRSAAEACGL VGDDGLKSVL DTIDSGLRAG LRRPRDLSEV WARAARDERR RQRRAGGSGA
DQADAAADES CGDAEIDRIA ALYPLPRLAS PPLFYERHRG RVMVHKEVPA KRRDAAAATV
AVPVATPFGM TARIRYLDRE DAYGLRIAVE DMSGRPRYID IERGDLARQG AGEIRALLFA
AGLRTEDDGE HIAVRALKAA DPKAEILVVS QPGWHELPDL ADPFFVCPGG EVIGTPEGSA
YELSVSTRMP PSVAASGSLP GWTDAVEAAI NVEACEHWTL GACAAFAGPL VSLTGLDTCG
LNLSGLSSSG KSTAQKIAVS AWSTPDIRKP GLAQSAKSTV NAMEALAARS SGTVLSLDEL
AHVTGAEVAR MIYTFAGGVG RRRMTADATL RESYTWSTFA ILSAECSLEE KVKTDERAEW
VAGMAARFAD VDVTSVNRSV DRPTLDRIAA IERNFGHAGP AFVRALVADG AHRDPVALRE
RIMADVKRIA GTAADSTQMR AAIPFALLRR AGELAVSYRL LPAETPVAAA VAWAWNQFMH
SSDARALDPE EQVVANLRAW VVQRWNVTLR EVGASGGGPR EAEGWFDEDA VYVLREKLRA
AAGNVMTEEA TAGVLRRNAL LFKEEKDGRP YLRYVRGLGK VQAYALKRPD FGREVFTNIV
DYPGQGRFAS
|
|---|
| |