| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_4005 |
|---|
| Symbol | |
|---|
| ID | 7307457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 4081209 |
|---|
| End bp | 4082705 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643601663 |
|---|
| Product | nitrogenase cofactor biosynthesis protein NifB |
|---|
| Protein accession | YP_002499193 |
|---|
| Protein GI | 220923891 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTC CAGTGTTCTC CCTCGATTCC CTGGTGGCGA CACCGATCTC GCTCGACGCG
ATGCGGGCGA AATTGCACGA GGGCGGTTGC TCGTCGTCCT CCTGCGGCTC TTCCGCCAAG
CCCGAAGAGA TGCCCGAGGA CGTCTGGGAC AAGATCAAGG ACCATCCCTG CTACTCGGAG
GAGGCGCACC ACTATTTCGC CCGCATGCAC GTCGCGGTGG CGCCCGCCTG CAACATCCAG
TGCAACTACT GCAACCGCAA ATACGATTGC GCTAATGAGA GCCGTCCCGG TGTGGTGTCA
GAGAAGCTCA CGCCCGATCA GGCGCTGCGC AAGGTCGTGA CGGTGGCCAA CGAGGTGCCG
CAGCTCTCGG TTCTCGGCAT CGCCGGCCCC GGCGACAGCT GCTACGATTG GAAGAAAACC
AAGGCCACCT TCGATGCTGT GGCGAAGGAG ATCCACGACA TCAAACTATG TCTCTCCACC
AACGGGCTCG CCCTGCCCGA CCACGTAGAC GAGATCGCGC AGATGAACGT CGACCACGTC
ACCGTGACCA TCAACATGGT TGATCCGGAG ATCGGGGCGA AAATCTATCC GTGGATCTTC
CATCAGCACA AGCGCTACAC GGGCGTCGAG GCGGCCCGCA TCCTGCACGA GCGGCAGATG
CTGAGCCTGG AGATGCTGCG CGCCCGCGGC ATTCTGGTGA AGGTGAACTC GGTCATGATC
CCCGGGATCA ACGACGACCA CCTGCTCGAA GTGAACAAGT GGGTAAGGGA GCGGGGCGCG
TTCCTGCACA ACGTCATGCC GCTGATCTCA GCGCCGGAAC ACGGCACCCA TTTCGGCTTG
ACCGGCCAAC GTGGGCCGAC CGCCATGGAG CTCAAGGCCC TGCAGGACAA GCTGGAGGGC
GGTGCCAAGC TGATGCGCCA CTGCCGCCAG TGCCGGGCCG ACGCGGTCGG GCTCATCGGC
GAGGATCGCG GCCAAGAATT CACCCGGGAT CAGCTCCCCG GCCAGATCAC CTACGATCCG
AGCAAGCGCG CCGCCTACCG TGAGCTCGTG GCGAGCGAGC GCGGCGACCA TCAGGTGAAG
AAACAGGCGG CGGCCGCGGA GCTCAAGGCC CTCGGGAGCG AGGAGAAGCT CCTCGTCGCG
GTCGCCACCA AGGGCGGCGG CCGGGTCAAC GAGCATTTCG GCCACGTCAA GGAGTTCCAG
GTCTACGAGG CGGGTCCGGG CGGCGTCACC TTCGTCGGCC ACCGCAAGGT CGAGGCCTAT
TGCATGGGTG GCTTCGGCGA GGACGCGACG CTCGACAGTG TGATCGCGGC GCTGGACGGG
GTCGAGGTCG TCCTCTGCGC CAAGATCGGC GATTGCCCGA AGGAGAGCCT GGAGGCGGCC
GGCATCCGTG CCACCGACGT CTATGCCTTG GAATACGTCG AAGCGGCGAT CGGCGCGGTC
TACACCGCAC GGTTCGGCCG CAGCGTCACC GGCGCCCGGC TGATGCTCTC GGCCTGA
|
|---|
| Protein sequence | MSSPVFSLDS LVATPISLDA MRAKLHEGGC SSSSCGSSAK PEEMPEDVWD KIKDHPCYSE
EAHHYFARMH VAVAPACNIQ CNYCNRKYDC ANESRPGVVS EKLTPDQALR KVVTVANEVP
QLSVLGIAGP GDSCYDWKKT KATFDAVAKE IHDIKLCLST NGLALPDHVD EIAQMNVDHV
TVTINMVDPE IGAKIYPWIF HQHKRYTGVE AARILHERQM LSLEMLRARG ILVKVNSVMI
PGINDDHLLE VNKWVRERGA FLHNVMPLIS APEHGTHFGL TGQRGPTAME LKALQDKLEG
GAKLMRHCRQ CRADAVGLIG EDRGQEFTRD QLPGQITYDP SKRAAYRELV ASERGDHQVK
KQAAAAELKA LGSEEKLLVA VATKGGGRVN EHFGHVKEFQ VYEAGPGGVT FVGHRKVEAY
CMGGFGEDAT LDSVIAALDG VEVVLCAKIG DCPKESLEAA GIRATDVYAL EYVEAAIGAV
YTARFGRSVT GARLMLSA
|
|---|
| |