| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_4004 |
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| Symbol | |
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| ID | 7307456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 4079172 |
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| End bp | 4080971 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643601662 |
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| Product | transcriptional regulator, NifA, Fis Family |
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| Protein accession | YP_002499192 |
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| Protein GI | 220923890 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTACG CGGACCTTTT TCCCTCCCGA ATCGAGACGG GCCTGCCCCA GGTGGAGCAC
GTCGTCCCGG AGCGGCTTGG GCAGCAGCCC GCCCCGCCGA GCCCGACCCC GAGGCTGCCC
GTCCAAGCGC GTCCCGCCTC AGCCTCGCGC GGCACCTCGG CCGAGGTGCA GCTCATCGGC
ATCTACGAGA TCTCCAAGGC GCTGACCGCG GTGCGCCACC TCGAGGTCAC CCTCACTAAG
GTGATCGACA TCCTCTCGTC GACTCTGAGC ATGCACCACG GCATGATCGT CATCCTCGAC
CAGGAGGGCG GGCCGGAAAT CGTCTCAAGC ACCGGCTGGA CGGCCCAGAT CGCCCACCAC
CTCCGCGCGT GCCTGCCCCA GCGGGCCATC GACCAAATCG TCGACACCGC GGCCCCGCTC
GTCGTGCAGG ACGTCAGCGC CGACCCGCTC TTCCACGGCC ATCTCGATCT GTTCGAGGAT
GCCGGCAAGG CCATCACGTC GTTCATCGGC GTGCCGATTA AGGCGGATTC ACGGGTCCTC
GGCACCCTCT CAATTGACCG GATCTGTGAC GGCAGCGCGC GCTTCTGCTC CGACGAGGAC
ACGCGCTTTC TCACCATGGT GGCGAACCTC ATCGGCCAGA CGGTGTGGCT CCACAACACG
CTGGCGCAGG ATCGCGACCG GCTCATCGCC AAAGCCCACC GGCTGGAGAA GGCCCTGGCG
GAAACGAGCG CGATCTCCTC CTCAGTCGGC CTTGTCGGCG AGAGCCAGGA GCTGAAGCGG
CTCGCCGCGA AGGCCGAGGT CGCGGCGCGC TCGAACACGA CTGTCCTGTT GCGCGGCGAG
AGCGGCACTG GCAAGGAGCT CTTCGCCCGC GCGATCCACG AACTCTCGCC CCGCAAGAGC
AAGCCCTTCG TGCGGGTCAA CTGCGCGGCG CTCGCCGACA GCGTGCTCGA ATCCGAGTTG
TTCGGGCACG AGAAGGGGGC CTTCACGGGC GCGATCGCGA CGCGCCATGG CCGCTTCGAG
GCCGCCAACG GCGGGACGCT GTTCCTCGAC GAGATCGGCG AGGTGAGCGC CACCTTCCAG
GCCAAGCTCC TGCGCGTCCT GCAGGAGGGG GAGTTCGAGC GCGTCGGCGG CAACCGCACC
ATCAAGGTCG ACGTGCGCCT CGTCTTCGCG ACGAACCGGA ACCTGGAGGA GGCGGTCACC
AAGGGCGACT TCCGCGCCGA CCTCTACTAC CGCATCAACG TGGTGTCGCT GATCCTGCCG
CCGCTGCGCG AGCGGCGGGG CGACATCCCG GATCTCGCGA AGGCCTTCCT CACCCGCTAC
AACAGCGAGA ACGGGTCGAA GCTCGCATTC TCGCAAGGCG CGATGGGGGT CCTGCTGAAG
TGCTACTTCC CGGGCAACGT GCGCGAGCTT GAGAACTGCG TCAGGGGCAC CGCGACGCTA
GCGGCCTCCG AGGAGCTGAT CATGTCGGAC GACTTCGCAT GCGTGAGCGG GCAATGCCTC
TCGGCGGTGC TCTGGAAGAG GAGCACGCCG AAGCCCTGGG ACGCCGCGGT GACGGCCGCC
ACACCCGTGC CGGTGAGCCC GGAGCGGCCG CCCACCCCGG CGGAGGCCGA GCCGCCCGCG
TCCTGCCCCG GCGCCAAGAC CCTCCCGGGC GTCCGGCCGC GCCCCACCAA GCAGCAGTTG
CTCGAGGCCC TAGAGCGCAC CGGCTATGTG CAGGCTAAGG CCGCCCGCCT CCTCGAGATC
ACGCCCCGCC AGCTCGGCTA TGCGGTGCGC AAGTACGACA TCCCCCTCAA AGAGTTCTGA
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| Protein sequence | MDYADLFPSR IETGLPQVEH VVPERLGQQP APPSPTPRLP VQARPASASR GTSAEVQLIG
IYEISKALTA VRHLEVTLTK VIDILSSTLS MHHGMIVILD QEGGPEIVSS TGWTAQIAHH
LRACLPQRAI DQIVDTAAPL VVQDVSADPL FHGHLDLFED AGKAITSFIG VPIKADSRVL
GTLSIDRICD GSARFCSDED TRFLTMVANL IGQTVWLHNT LAQDRDRLIA KAHRLEKALA
ETSAISSSVG LVGESQELKR LAAKAEVAAR SNTTVLLRGE SGTGKELFAR AIHELSPRKS
KPFVRVNCAA LADSVLESEL FGHEKGAFTG AIATRHGRFE AANGGTLFLD EIGEVSATFQ
AKLLRVLQEG EFERVGGNRT IKVDVRLVFA TNRNLEEAVT KGDFRADLYY RINVVSLILP
PLRERRGDIP DLAKAFLTRY NSENGSKLAF SQGAMGVLLK CYFPGNVREL ENCVRGTATL
AASEELIMSD DFACVSGQCL SAVLWKRSTP KPWDAAVTAA TPVPVSPERP PTPAEAEPPA
SCPGAKTLPG VRPRPTKQQL LEALERTGYV QAKAARLLEI TPRQLGYAVR KYDIPLKEF
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