Gene Mnod_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3972 
Symbol 
ID7307424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4046434 
End bp4047333 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID643601634 
Productdihydrodipicolinate synthetase 
Protein accessionYP_002499164 
Protein GI220923862 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGTG TAAGTTGGGG TGGTATCTTC CCCGTTCTCG TGACCCCCTT CGGAGCTGAT 
GGCTCGATCA ACGAGACCCG GTACAAGGCG CTCATTGACG ACGCGATCGC CAATGGCGCG
CAAGGGGTGG TGGCCGCCGG CAGCACCGGC GAGTTCTATG CCCTCACCAA AGCCGAACGC
GCGCGCCTGT TCAAGCTGGC CGTTGACCAC GCGGCGCGCC GCGTGCCCGT GCTGGCCGGT
GTCGCCGACC TCCGGGTGGA GGATGTCCTG GAAGCGTGCC AGTCCGCGGT CGCGGCGGGC
TGCGCGGGCG GCCTGATCCT GCCGCCGATC TACGCCATGC CGAGCCCGCG TGAGGTCGTG
GCCTTCTTCG CGCACATCTC GCGCAACACC CCGCTGCCGC TGATGCTCTA CAACAGCCCG
CGCCGGGCGA AAATCGAGCT CACCCCGGCG CTGGTGGAGC AGCTCTCCGC GCTGCGGACC
GTGGTTGCCA TCAAGGACAG CTCCGGCGAC ATCACCCAGG TGAGCGAGCT CGTGCAGCGC
GTGGGTGACA ACCTCCGCGT CTTCGTCGGC TACGAGACCA TGATCGTTCC CGCCCGGGCC
GTGGGCGCCC ATGGGGTCAT CGCCATGGCG CACCAGATCG CCGGCCCCTT GATCCGCGCC
TACTGGGACA AGGCGCTCAG CGGGGACAAG GCCCTGGAGG ACCTCGGTCG CGATGTCTGC
GCCTTGTATC GCTGCTTCCA GTCCGGGTCC TATTACGCGG CCATCAAGGA GACCATGAGC
CAGCTTGGGC GCGACGCCGG CGGCCCGCGC CTGCCGCTGC TGCCGCTGGC AGACGAACAA
AAGGCCGCCA TCGCCAAGAT CATTGCCGAT GCCGGCCTCG AGCGTTGGGC TAAAGCCTAA
 
Protein sequence
MARVSWGGIF PVLVTPFGAD GSINETRYKA LIDDAIANGA QGVVAAGSTG EFYALTKAER 
ARLFKLAVDH AARRVPVLAG VADLRVEDVL EACQSAVAAG CAGGLILPPI YAMPSPREVV
AFFAHISRNT PLPLMLYNSP RRAKIELTPA LVEQLSALRT VVAIKDSSGD ITQVSELVQR
VGDNLRVFVG YETMIVPARA VGAHGVIAMA HQIAGPLIRA YWDKALSGDK ALEDLGRDVC
ALYRCFQSGS YYAAIKETMS QLGRDAGGPR LPLLPLADEQ KAAIAKIIAD AGLERWAKA