| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3957 |
|---|
| Symbol | |
|---|
| ID | 7307409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 4031118 |
|---|
| End bp | 4032017 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643601620 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_002499150 |
|---|
| Protein GI | 220923848 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATG TTGACTGGGG CGGCATCTTC CCGGTTCTCG TCACCCCGTT CGGGCCTGAC
GGGTCCATCA ACGAGGTGCG ATACAAGGAA CTGGTCGACG AAGCGATAAG GAACGGTGCT
CGCGGCATCG TTGCGGCTGG TAGCACGGGC GAATTCTATG CACTCACGAT CGGTGAGCGC
GCCCGCCTCT ATAAGCTGAC GGTCGATCAC GTCGCCGGCC GGGTCCCCGT CTTGGCCGGG
GTTGCCGACC TCCGCGTCGA GGATGTGGTC GATGCCTGCC AGTCCGCGGT CGCAGCCGGT
TGCGCCGGCG GTATGATCCT GCCGCCCATC TACGCCATGC CAAGCCCGTG CGAGATCGTC
GCCTTCTTCG AGCACGTCTC CAAGAACACC TCCCTGCCGT TGATGCTGTA CAACAGCCCG
AGGCGCGCAG GGGTCGATAT CCCTCCGGCC CTGGTCGAGC AGCTCTCCAA GCTTCCCACC
ATCGTCGCCA TCAAGGACAG CTCCGGGCTA ATCAATCAGG TCACCGAGCT GGTGCAGCGC
GTCGGCGGCA GGCTTCGCGT CTTTGTGGGG TACGAAACCA TGATCGTGCC GGCCCGTGCG
GTTGGCGCCC ATGGCGTCAT CGCCATGGCA CACCAGATCG CCGGGCCTCT CATCCGCGAT
TACTGGGACC ACGCGTTGGA AAACGGGAAA GCCGTCGAGG ACATGGGTCG CGACGTCTTC
GCATTCTACC GCTGCTTCCA GTCGGGCGCC TATTACGCAG CGATCAAGGA GACCATGACG
CAGCTCGGGC GTGACGCGGG CGGGCCGCGC CTGCCGTTGC TCCCGCTGGC CGACGACCAG
AAGGCTGCGA TCGCCAAGAT CATCGGAGAA GCCGGGCTGA GCCGCTGGGC GAAGGCCTGA
|
|---|
| Protein sequence | MANVDWGGIF PVLVTPFGPD GSINEVRYKE LVDEAIRNGA RGIVAAGSTG EFYALTIGER
ARLYKLTVDH VAGRVPVLAG VADLRVEDVV DACQSAVAAG CAGGMILPPI YAMPSPCEIV
AFFEHVSKNT SLPLMLYNSP RRAGVDIPPA LVEQLSKLPT IVAIKDSSGL INQVTELVQR
VGGRLRVFVG YETMIVPARA VGAHGVIAMA HQIAGPLIRD YWDHALENGK AVEDMGRDVF
AFYRCFQSGA YYAAIKETMT QLGRDAGGPR LPLLPLADDQ KAAIAKIIGE AGLSRWAKA
|
|---|
| |