| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3799 |
|---|
| Symbol | |
|---|
| ID | 7308392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 3912191 |
|---|
| End bp | 3913363 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643601475 |
|---|
| Product | outer membrane autotransporter barrel protein |
|---|
| Protein accession | YP_002499006 |
|---|
| Protein GI | 220923704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAT GCGTCAAGAC CGCCACAAGC GACAACATGA CACGGACATG GCACCCGGTG
CATGCGCCTG AGCTCGCGTT CCCCTGGTGC GATCAGGCCC ACGCCGATTT CGACTACGCG
ACCCTTGACG TCCCGGGGAT CTTCGTGACC GGTGTGCGGT CCGACAGCGC CACGACCGAT
GCCGTCGTCG TCACCGCCAG CGACGTGACC GGCGGCACCA CCAGCGCCGC CCTGTATCAG
GGCTCGCTGC AGGACCTCGC GTCGGCGCCC GCGAGCCAGT GGAACGTGCT CACGCCGGTC
TTCCCGGGCC AGACGGTAAC CAGTTCCACC TTCTACGGCC CGAACACCCC CAGCTTCGAC
CCGAGCCTCG GTGATGGGGA GGTCCGCGCC GTCGGCAGCT ACAAGTATGC CGAGGGCCTG
TCGGGGCCCG ACTTCGACCA CGGGATGATC TACCAGGGGC CGGCCAACGG CGTCGGGGGC
ACCTGGACCC AGATCGACGC CACCAGCCTG GTGGGCGCCG GCGATACGCT GCTGGACACG
ATCGCGCACA GCACCATGGG CGATCTGGTC GTGGGCAACT ACGACACCAG CCTCTCGACC
GGCCACGCCT TCATCTACGA CATGGCGAGC GACCAGTGGA CCGACCTGAA CCCCGCAGGC
TCGCTGAGCG TCACCGCCTA TGGCATCTGG CAGAACGGCG ACAGCACCAG CACCTCCTAT
ACGATCGCCG GGGGCTACAG CGACCTGAAC AGCCTCGGCC TGGATGCGGG GTACTTGGTC
GACTACGACT CCGCCACGCA CGCGTTCAGC CACTTCACGA CCTTCGAGTT TGACAACCAG
CCGCTCGCCG CGCTGATCTC GCATTTCGAC GGGATCACCG GCACGGCGGA CGGCTACAAC
CTCACGGGCG ACTTCGTCCG CGGCGAGACC GAAGGCGCGT TCTTCGCCCA AATCGAGCGG
CGGGCGGACG GCAGCTTCGC CGAGCCGCTC TGGACCGAGA TCGCCTACCC GGGGGAGGAT
GTGACCTTCA CCAGCGGGAA CACCGTTATC GACGACACGG TACTCGGCAT CTACGTCGCC
GGCGGAGAGA CGCATAGCTT TGTCGCCAGC GCCGCGGTGC CGGAGCCCGA CCCGCTGGCG
AGCTGCGGGC GCAGCTGGGA AAGCTGGGGC TGA
|
|---|
| Protein sequence | MTSCVKTATS DNMTRTWHPV HAPELAFPWC DQAHADFDYA TLDVPGIFVT GVRSDSATTD
AVVVTASDVT GGTTSAALYQ GSLQDLASAP ASQWNVLTPV FPGQTVTSST FYGPNTPSFD
PSLGDGEVRA VGSYKYAEGL SGPDFDHGMI YQGPANGVGG TWTQIDATSL VGAGDTLLDT
IAHSTMGDLV VGNYDTSLST GHAFIYDMAS DQWTDLNPAG SLSVTAYGIW QNGDSTSTSY
TIAGGYSDLN SLGLDAGYLV DYDSATHAFS HFTTFEFDNQ PLAALISHFD GITGTADGYN
LTGDFVRGET EGAFFAQIER RADGSFAEPL WTEIAYPGED VTFTSGNTVI DDTVLGIYVA
GGETHSFVAS AAVPEPDPLA SCGRSWESWG
|
|---|
| |