Gene Mnod_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3790 
Symbol 
ID7308383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3903453 
End bp3904247 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID643601466 
ProductFlp pilus assembly protein CpaB 
Protein accessionYP_002498997 
Protein GI220923695 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3745] Flp pilus assembly protein CpaB 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCGCC TTTGCCTCCT GATCGTTGCA CTGGGTGCCG GGATCGCGGC CGCCTGGCTC 
GCCGTGAGCT TACGCGATCA GCCGGTCGCA GCCGTCGTGC CTGCGCCGGT ACAGCCGGCG
ACACAGGACG TACTCGTCGT TTCGACCGAG CTTGCGCAAG GAGAACGGCT GACGAAAGAG
AACATGCGGT GGCAGCCTTG GCCGGAGAGC GCGCTGAACT CCGCTTACGT GACTCGTTCG
GCTCGGCCCG CCGCTCTCGA TGAGTTCGCC GGCTCGACCT TGCGCAGCCG CATGGCGCCG
GGCGAACCCG TTCAAGACGG GAAGCTTGCG GGCCTCAATG CCGGCTTCCT CGCCACGGTC
CTCCCCTCGG GCAAGCGCGC GGTAGCCGTG CGGATTTCTG CGGAGAACAC GGCCGGCGGC
TTCATTCTGC CCAGTGATCG GGTTGATGTT ATCCACACGT TCGCGCCGCA GGCCCAAGGT
GAGGGCGCGC GCGAGCACCG CAGCCGCACA ATCCTGAAGA ACGTTCCCGT GCTCGCCATC
GATCAGACGG TCGACGAAGC GCAAAAGGCC GATAAAGGCA AAGGGAAATC CGTCGTCATC
GGCAAGACGG CCACTCTCGA GCTGGATTCG CGGCAGGCGG AGATCTTGGC GGCTGCCGAA
GCTGCCGGCA CACTCTCGCT TTCGCTCCGC TCCGCCGCCG ACAGCAACGA AGTCCCGACG
GCTGCTACGG AAGAGAGGAT CCAGACCGTA CGCGTCATCC GAGGTGGACG CAGCGAAGTC
GTGAAGATCC AGTAA
 
Protein sequence
MLRLCLLIVA LGAGIAAAWL AVSLRDQPVA AVVPAPVQPA TQDVLVVSTE LAQGERLTKE 
NMRWQPWPES ALNSAYVTRS ARPAALDEFA GSTLRSRMAP GEPVQDGKLA GLNAGFLATV
LPSGKRAVAV RISAENTAGG FILPSDRVDV IHTFAPQAQG EGAREHRSRT ILKNVPVLAI
DQTVDEAQKA DKGKGKSVVI GKTATLELDS RQAEILAAAE AAGTLSLSLR SAADSNEVPT
AATEERIQTV RVIRGGRSEV VKIQ