Gene Mnod_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3789 
Symbol 
ID7308382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3902099 
End bp3903370 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID643601465 
Productresponse regulator receiver protein 
Protein accessionYP_002498996 
Protein GI220923694 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.956879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACC TCGCTTTCAA GATCACCGCT CCGGCGCCGC AAGGCTGCCG AGCCCAGACC 
CTGGATACAC TGCGGGTCCC GCAGATCTCG GTGCACGCAT TCTGTGATAC GCCGGAAACG
GCAGCCACGC TGGAGGCGGC TTTCGCCGAC CGGCGGATGT CGCGTGCCCA TGCCAGCGTG
TATCCCGGCG GCATTCCCGC CGCAGCCGCA CATTACCGCC AAGCAACGAC GCCGAATCTC
CTGGTTTTGG AGGCGAGCGA CGCCGGAAGC CGCCTTTTGG CGGACCTCGA GATCTTGGCC
GAGGTCTGCG ACCGCAGCAC GAAGGTCGTG GTCATCGGGA AGGTCAATGA CATCAGGCTC
TACCGCGAAC TCCTCGACCG AGGCATCAGC GAGTATCTTG TGGCTCCTGT CGAACCGGTG
GGCCTCATCG CTGCTGTCGC ACAGCTCTAC CGCGACGCTG GTGCGAGCAA GCTCGGCCGA
AGCTTGGCCT TCATCGGCGC GAAGGGCGGC GTCGGATCGT CGGTGGTCGC CCATAATGTG
GCCGCGGCCA TCGCCCGATC CTACGACACC GAGGTGATCC TGGCGGATCT GGACTTGCCG
TTCGGCAGTG CGAGCCTCGC GCTCAACCTG GATCAGGAAA AGGGCCAAGG CATCGCGGAT
GCGTTGGCAA ACACAGGCCG GCTCGACGAT GTACTGCTGG AGCGTCTGCT GACGAAGTCC
GGGGAGCATC TCTCGGTCCT GAGCGCTCCG GCCACCTTGG ATCATTGCCA TGATTTGGAC
GGAGGCGCCT TCGAGCGTCT GATCGAGGTC GCGCAGGCGA GTGTGCCCTT TGTGGTGCTG
GATCTTCCTC ATGTCTGGAT GCCCTGGGCG AAGAGCACCT TGCTGGCTGC AGACGAGGTG
GTCATCACGG CCACTCCTGA TCTGACAAGC CTCCGAAATG CCAAGAACCT GATCAGCTTT
CTGACGCAGG CGCGCCCGAA CGATGCGCTT CCGAAGCTCG TGCTCAATCA GGTCGGGGTT
CCGAAGCGGG CCGAGATCAA GGTCGACAAG TTCGCCGCGG CGCTCGAACT CGAGCCGGCG
GCCTGCATCC CTTTCGAAGC TTCGGTCTTC AGCACGGCGG CGAACGAGGG CCGATTGGTT
GCGGACGTCT CCGCGAAAGC CCGGGCCTGC AGCGCGTTCG ATCACATCGC TCGAGTCATA
TCCGGTCGAA ACGCACCGGC AATCCGCAAG GGCCGCTTCT CTCTCGAACG CTTCCGGAGG
ACCGGGCGAT GA
 
Protein sequence
MTNLAFKITA PAPQGCRAQT LDTLRVPQIS VHAFCDTPET AATLEAAFAD RRMSRAHASV 
YPGGIPAAAA HYRQATTPNL LVLEASDAGS RLLADLEILA EVCDRSTKVV VIGKVNDIRL
YRELLDRGIS EYLVAPVEPV GLIAAVAQLY RDAGASKLGR SLAFIGAKGG VGSSVVAHNV
AAAIARSYDT EVILADLDLP FGSASLALNL DQEKGQGIAD ALANTGRLDD VLLERLLTKS
GEHLSVLSAP ATLDHCHDLD GGAFERLIEV AQASVPFVVL DLPHVWMPWA KSTLLAADEV
VITATPDLTS LRNAKNLISF LTQARPNDAL PKLVLNQVGV PKRAEIKVDK FAAALELEPA
ACIPFEASVF STAANEGRLV ADVSAKARAC SAFDHIARVI SGRNAPAIRK GRFSLERFRR
TGR