Gene Mnod_3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3748 
Symbol 
ID7308341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3859270 
End bp3860475 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content66% 
IMG OID643601426 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002498957 
Protein GI220923655 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.253584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAGT CTGTCGTCAC GCGCGCCGTC CTGGCCGCAT TGTTCGGACT CGCGGCCAAT 
GCGGCGCAGG CCGAGGTGAA GTTCGGTGCG CTCTACCCGT TCAGCGGCCA GCTCGCGCTG
CTCGGCGAGG AGAGCGCGCG CGGGCTCGAG ATCGCGGTCG ACGAGATCAA CGCGGCCGGC
GGCGTCCAGG GCGAGAAGGT GGTGCTCGTC CGCGGCGATG CGGTGGACAA CAACCAGGCC
ATTGGCGAGG CGCGCCGCCT GATCGCGCTC GAGCGGGTGG CGGCGATCTT CGGCACCTAT
TCGTCGGCCC GCTCCATCGC GGCGAGCCAG GTGGCGGAGC TCTCCGGCGT GCCGTATTTC
GAACTCGGCG CCGTCGCCGA CGAGGTCACG GGCCGCGGCC TCAAGTTCCT CTACCGCACC
AATCCGACCG CCGAGGACAT GGGCAAGCTC GCGGTCGAGA TGATCGTCAC CAAGGTCGCG
GGCGGCCTCG GCAAGAAGCC GGAAGACCTG AAGATCGGCA TCATCCACGA GGATTCGAGC
TACGGCACCT CGGTCGCCGG GCATCAGAAG AAGTTCGCGG CGGCGGCCAA GCTGAACGTG
GTCACCGTGC AGCCCTATCC GGCCGCGACG GTCGACATGT CCTCGCTCGT CCTCGACCTC
AAGCGGCGCG GCGTCGATAT CGTGCTGCAG ACCTCCTACC AGAACGACTC CGTCCTGTTC
CTGCAGCAGG CGAACGAGGC CGGCTTCAAG CCGGGCGCGA TCATCGGCGG GGGCGGCGGC
TACTCCATGC AGCCGACCGC CGACGCGGTC GGTCACTCTG TCATTGAGGG CGTGCTCGAC
ACCGACTTCA CCCAGTTCCT CGTGAACACC AAGTACACGC CGGGCATCGA GGGCTTCGTC
GAGACCTACA AGAAGAAGTA CAACGCCAGC CCGCGCTCCG GCCATTCTCT CAACAACTAT
GTCGGGGCGA AGGTCATCCT GGAGGCGCTC AACAAGACGA AGGGCTTCAC GCCGGACACG
ATCACCAAGG CGATGAAGGA GATCGACGTC AAGCCGGGCG TGACGGCAGT CGGCTACGGC
ATCAAGTTCG GCGCCAATAA CCAGAACGAA CGGGCCGCCA TGATGGGCAT GCAGTGGCAG
AACGGCAAGC TCGTCACCGT CTATCCGGAC GAGGCCGCCG TGTCGCCCAT GCAGCTGCGC
AAGTAG
 
Protein sequence
MGQSVVTRAV LAALFGLAAN AAQAEVKFGA LYPFSGQLAL LGEESARGLE IAVDEINAAG 
GVQGEKVVLV RGDAVDNNQA IGEARRLIAL ERVAAIFGTY SSARSIAASQ VAELSGVPYF
ELGAVADEVT GRGLKFLYRT NPTAEDMGKL AVEMIVTKVA GGLGKKPEDL KIGIIHEDSS
YGTSVAGHQK KFAAAAKLNV VTVQPYPAAT VDMSSLVLDL KRRGVDIVLQ TSYQNDSVLF
LQQANEAGFK PGAIIGGGGG YSMQPTADAV GHSVIEGVLD TDFTQFLVNT KYTPGIEGFV
ETYKKKYNAS PRSGHSLNNY VGAKVILEAL NKTKGFTPDT ITKAMKEIDV KPGVTAVGYG
IKFGANNQNE RAAMMGMQWQ NGKLVTVYPD EAAVSPMQLR K