Gene Mnod_3647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3647 
Symbol 
ID7303153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3741069 
End bp3742118 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content68% 
IMG OID643601317 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002498859 
Protein GI220923557 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.820698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCGT TGCTTCGCAA GACCGCCCTG GCCCCGCTGG CCCTGCTCGC CTGGACGGCC 
GGCCCGGCCT CGTCCGCCGA GCAGATCACC TTCGTGTCCC AGGGCGGCGC CTACCAGCAG
GCCCAGACCG TCGCGATCCT CGATCCCGCC GCCAAGGCGC TCGGCATCAC CATCAATCAG
GACAGCGCCC CCGATGCCTG GCCGGTGATC CGCACGCAGG CAGCGACCGG CAAGCCCACC
TGGGACGTGG TCGACACCCC GACCCAGGAC TGCGTGCGGG GCGGAAAGGC CGGGATGATC
GAGAAGCTCG ACTTCTCCAA GATCCCGAAC GCGGAGGCGA TCCCGGCCAC TTACAAGACC
GAATACTCCG TCCCCTACGA GTTCTATTCG AGCGTTCTCG CCTACAGCAA GAGCAAGTAC
GGCAAGAATC CGCCCCAGAG CTGGGCCGAC TTCTGGGACG TGAAGAAATT CCCGGGCGCG
CGGGCGCTGC GCAACCATCC CTTCGCCACT CTGGAGGCAG CCCTGATGGC CGACGGCGTG
GCGCCCGACA AGCTCTACCC CCTCGACGTC GACCGGGCCT TCCGCAAGCT CGAGGAGATC
AAGCCCCACA TCTCCGTGTG GTGGACCTCC GGCGGCCAGT CCGCGCTGCT GATCCAGGGC
GGCGAGGTCG ACATGGAGAT GATCTGGAAC GGCCGCGTCT CGGCCGTGAT CGACGCGGGC
GCGGATGCCG CCTTCACCTT CAACCAGGGC ATCCTGCAGA GCACCTCGCT GTGCATCCTG
AAGAACGCCC CGAACCTCGC CACCGCCGTG AAGTTCGTGA ACCAGGCGAT CGACCCGAAG
CTCCAGGCCA ACCTGCCGCT GCAGATCCCC TACGGCCCCG GCAACCCGGC CGCCTTCGAC
ACCGGCATCA TCCCGGCCGA CCTCGCCGCC AAGCTTCCGA GTGCGCCCGA CAACGCCAGG
AAGCAGGCGG TGCTCTCGGC CGCGTGGTGG ACCTCGGAGG CGGGCGACGC GGCGCTGAAG
CGCTGGGCGG AGTTCGTGCA GAAGAAGTGA
 
Protein sequence
MASLLRKTAL APLALLAWTA GPASSAEQIT FVSQGGAYQQ AQTVAILDPA AKALGITINQ 
DSAPDAWPVI RTQAATGKPT WDVVDTPTQD CVRGGKAGMI EKLDFSKIPN AEAIPATYKT
EYSVPYEFYS SVLAYSKSKY GKNPPQSWAD FWDVKKFPGA RALRNHPFAT LEAALMADGV
APDKLYPLDV DRAFRKLEEI KPHISVWWTS GGQSALLIQG GEVDMEMIWN GRVSAVIDAG
ADAAFTFNQG ILQSTSLCIL KNAPNLATAV KFVNQAIDPK LQANLPLQIP YGPGNPAAFD
TGIIPADLAA KLPSAPDNAR KQAVLSAAWW TSEAGDAALK RWAEFVQKK