Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_3647 |
Symbol | |
ID | 7303153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 3741069 |
End bp | 3742118 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643601317 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002498859 |
Protein GI | 220923557 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.820698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCATCGT TGCTTCGCAA GACCGCCCTG GCCCCGCTGG CCCTGCTCGC CTGGACGGCC GGCCCGGCCT CGTCCGCCGA GCAGATCACC TTCGTGTCCC AGGGCGGCGC CTACCAGCAG GCCCAGACCG TCGCGATCCT CGATCCCGCC GCCAAGGCGC TCGGCATCAC CATCAATCAG GACAGCGCCC CCGATGCCTG GCCGGTGATC CGCACGCAGG CAGCGACCGG CAAGCCCACC TGGGACGTGG TCGACACCCC GACCCAGGAC TGCGTGCGGG GCGGAAAGGC CGGGATGATC GAGAAGCTCG ACTTCTCCAA GATCCCGAAC GCGGAGGCGA TCCCGGCCAC TTACAAGACC GAATACTCCG TCCCCTACGA GTTCTATTCG AGCGTTCTCG CCTACAGCAA GAGCAAGTAC GGCAAGAATC CGCCCCAGAG CTGGGCCGAC TTCTGGGACG TGAAGAAATT CCCGGGCGCG CGGGCGCTGC GCAACCATCC CTTCGCCACT CTGGAGGCAG CCCTGATGGC CGACGGCGTG GCGCCCGACA AGCTCTACCC CCTCGACGTC GACCGGGCCT TCCGCAAGCT CGAGGAGATC AAGCCCCACA TCTCCGTGTG GTGGACCTCC GGCGGCCAGT CCGCGCTGCT GATCCAGGGC GGCGAGGTCG ACATGGAGAT GATCTGGAAC GGCCGCGTCT CGGCCGTGAT CGACGCGGGC GCGGATGCCG CCTTCACCTT CAACCAGGGC ATCCTGCAGA GCACCTCGCT GTGCATCCTG AAGAACGCCC CGAACCTCGC CACCGCCGTG AAGTTCGTGA ACCAGGCGAT CGACCCGAAG CTCCAGGCCA ACCTGCCGCT GCAGATCCCC TACGGCCCCG GCAACCCGGC CGCCTTCGAC ACCGGCATCA TCCCGGCCGA CCTCGCCGCC AAGCTTCCGA GTGCGCCCGA CAACGCCAGG AAGCAGGCGG TGCTCTCGGC CGCGTGGTGG ACCTCGGAGG CGGGCGACGC GGCGCTGAAG CGCTGGGCGG AGTTCGTGCA GAAGAAGTGA
|
Protein sequence | MASLLRKTAL APLALLAWTA GPASSAEQIT FVSQGGAYQQ AQTVAILDPA AKALGITINQ DSAPDAWPVI RTQAATGKPT WDVVDTPTQD CVRGGKAGMI EKLDFSKIPN AEAIPATYKT EYSVPYEFYS SVLAYSKSKY GKNPPQSWAD FWDVKKFPGA RALRNHPFAT LEAALMADGV APDKLYPLDV DRAFRKLEEI KPHISVWWTS GGQSALLIQG GEVDMEMIWN GRVSAVIDAG ADAAFTFNQG ILQSTSLCIL KNAPNLATAV KFVNQAIDPK LQANLPLQIP YGPGNPAAFD TGIIPADLAA KLPSAPDNAR KQAVLSAAWW TSEAGDAALK RWAEFVQKK
|
| |