Gene Mnod_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3638 
Symbol 
ID7303144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3731268 
End bp3731912 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content74% 
IMG OID643601308 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002498850 
Protein GI220923548 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.512029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGGG CGGAGGACCC GAGCGACGAG GATCTGCTGC CGCGCCTGCG GGCGCGCGAC 
GAGTCGGCGT TCCGGCTGCT GGTGCGGCGC CACCATCTGC GCCTCGTCGC GGTGGCGCGC
GGGGCCGCGC TGCCGCCCGA ATCTGCCGAG GAGGTGGTGC AGGAGGCCTG GATCGCCATG
ATGCGCAATC TCGACGGCTT CGAGGGGCGC GCCTCCCTGC GCACCTGGCT CACGGGCATC
GTGCTCAACC TCGCCCGCAA GGCGGTCCTG GCGCGGCAGC GCACCAGCAC CTTCTCGGAT
CTCGCTGCGC CTGGAGCGGA GGCGGAGGCC TTCGACGAAG CGGCGTTTCT CCCCGACGGG
CACTGGCGCG ATCCGCCCTG GCACTGGTCG GAGGTCGATC TCGAGCGGGC GCTGGCCGGC
CGTCAGGTCT GGGCGGCGGT GCAGGAGGCG ATCGGGGCGC TGCCGCCGCT CCAGGCCGCG
GTGCTGCGCC TGCGCGACGT CGAAGGTTTT GGCGTCCGGG AGACGGAAAC CCTGCTCGGC
CTGAGCGAGG CGCGCCAGCG CGCGCTCCTC GACCGTGCAA GGATCCGGAT CCGTGCGACC
TTCGAGCGCC TGACCCGGGA GGCGCCCCCG CGCCGAGCGC CGTGA
 
Protein sequence
MAGAEDPSDE DLLPRLRARD ESAFRLLVRR HHLRLVAVAR GAALPPESAE EVVQEAWIAM 
MRNLDGFEGR ASLRTWLTGI VLNLARKAVL ARQRTSTFSD LAAPGAEAEA FDEAAFLPDG
HWRDPPWHWS EVDLERALAG RQVWAAVQEA IGALPPLQAA VLRLRDVEGF GVRETETLLG
LSEARQRALL DRARIRIRAT FERLTREAPP RRAP