Gene Mnod_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3482 
Symbol 
ID7308847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3599804 
End bp3600556 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID643601152 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002498696 
Protein GI220923394 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA AGGACGTCGC GCTGATCACC GGCGCGGCCC GCGGCATCGG CTTCGGCATC 
GCCGAAAGTC TCGCGCGGGC GGGTTACGAC ATCGCGCTCC TCGACCTCGA CCGGGCGGCA
GTCGAGGGCG CCGCTCGGCA AATCGGCGAC CTCGGCGGTG GACGGGTCGT GGCGACGACC
GCTGACGTGA CGAACCGGAC TGAGGTCGAG GCGGCGGTTG CGGCCGTTCA CGCCGCCTTC
GGTCGGATCG ACGTGCTCGT GAACAACGCC GGGATCGTCC GCGACCGCAG GCTCGTGAAG
ATGGACGAGA GCGACTGGGA CGCGGTCATC GCCGTGAACC TGAAGTCGCA ATTCCTCATG
TGCAAGGCCG TGGTTCCGGG GATGATCGAG CGGGCCTACG GCCGCATCGT CAACATCTCG
TCCCGGGCTT GGCTCGGCGG CTTCGGCCAA GCGAACTACT CGGCCGCGAA GGGCGGTGTC
GTCAGCCTGA CGCGCAGCCT CGCGATCGAG CTCGCCCGAA ACGGCATCAC GGTGAACGCC
ATCGCGCCCG GCATCGTCGA GACGCCGCTC TTCCAGAATT TCGAACCCGA GGTGCAGGAG
CGCCTCAAGA AGAGCGTGCC GATGCAGCGG ATCGGCACGC CGAAGGACAT CGCGCAGGCG
GCCGTGTTCT TCGCAGGCCG GGCGAGCAGC TACATCACCG GCCAGCTCAT CTACGTCTGC
GGCGGCCGCA GCCTGTCGAG CCCGAGTGTC TGA
 
Protein sequence
MAEKDVALIT GAARGIGFGI AESLARAGYD IALLDLDRAA VEGAARQIGD LGGGRVVATT 
ADVTNRTEVE AAVAAVHAAF GRIDVLVNNA GIVRDRRLVK MDESDWDAVI AVNLKSQFLM
CKAVVPGMIE RAYGRIVNIS SRAWLGGFGQ ANYSAAKGGV VSLTRSLAIE LARNGITVNA
IAPGIVETPL FQNFEPEVQE RLKKSVPMQR IGTPKDIAQA AVFFAGRASS YITGQLIYVC
GGRSLSSPSV