Gene Mnod_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3480 
Symbol 
ID7308845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3597785 
End bp3599005 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content68% 
IMG OID643601150 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_002498694 
Protein GI220923392 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACGA CCCCGACTGC TGCCCAGGCC GCGGCTCCTG CCGCCCATCC ACTTGAGCGG 
ACGCTCGATG GCCTTCGCGT CATCGATTTC TCGCAGGTCG CCGCCGGGCC CCTATCGACG
ATGATTCTCG CGGATCTGGG CGCGGATGTC ATCAAGATCG AGCCGCCAAC CGGCGATATC
GGCCGGACGC TCGGGCCGCC CTTCATCGAA GGCGAGAGCA CGGTCTTCCT CTCGCTCAAC
CGGAATAAGC GCAGCGTCAC GCTCGATCTG AAGTGCGAGG AGGGGCGGGC GCGCGCCCGC
GCCCTGATCG CGACGGCCGA CATCCTCGTC GAGAGCTTCC GGCCCGGTGT TGCGGACCGG
CTCGGTATCG GCTTCCAGGC GGCGCGGGCC ATCAACCCGC GGTTGATCTA CTGCTCGATC
TCGGCCTACG GCCAGCATGG TTCCTGGTCC CACAAGCCCG GCGTCGATGG CGTCGTCCAG
GCCGTATCTG GCCTCATGAG CGTGATCGGC CATGAGGGCG AGCCGCCTTC CAAGGTCCAG
GCCCCCATCA TCGACATGGT GACGGGCTAC CATGCCGCCC TGGCGATCCT CGCCGCCGTC
AACCAGCGCG CTGCCGGCTC GGTCCCCGGC CATCTCGATG TCAACATGTT CACGAGCGCG
GTGATGCTCC AGCAGGTGAC GCTGTCCAGC TATCTAACCA CCGGGGAGCT GCCGGTGCGG
TGCGGAAGCG GCGCGCCTTA CGCCACGCCG AACGAGGCAT ACCAGACCGC GGACGGCTAT
GTTCTGGTCG CTGCCTATCA GCCGGAGCGC TGGCGCCGAC TCTGCGTCGC CCTCGACCGC
CCCGATCTCG CTGATGACCC ACGCTTCGGC ACGCTGTCCG AGCGCATGGC CAATCGCGAC
GCGCTGACGG CGGAGCTGAC CGGCGCGTTT CGCCACCGAC CCACGGGCGA ATGGGTCGCG
AGGCTCGAAG GAGCCGACAT CATCTGCGCC GCCGTCTCGG ATTACGACGA CGTGGCAAGC
CTGCCACTGC TGGCCGAGAG CGGAGTGCTG ACGACGGTCC ACCACCCCGC GGCAGGCCAT
ATCGTCATGC CAGGCTTCGC GATAGGCGGC CGCTCCATGG CCGCGCGCCG GCCGCCCCCG
CGGCTGGGCG AGCACAATTC GCTCCTGAAC GAGGGGCCAC TGCCAAAACT CCCGGCGCTG
GCGGACACCT GCAGGGGGTA G
 
Protein sequence
MTTTPTAAQA AAPAAHPLER TLDGLRVIDF SQVAAGPLST MILADLGADV IKIEPPTGDI 
GRTLGPPFIE GESTVFLSLN RNKRSVTLDL KCEEGRARAR ALIATADILV ESFRPGVADR
LGIGFQAARA INPRLIYCSI SAYGQHGSWS HKPGVDGVVQ AVSGLMSVIG HEGEPPSKVQ
APIIDMVTGY HAALAILAAV NQRAAGSVPG HLDVNMFTSA VMLQQVTLSS YLTTGELPVR
CGSGAPYATP NEAYQTADGY VLVAAYQPER WRRLCVALDR PDLADDPRFG TLSERMANRD
ALTAELTGAF RHRPTGEWVA RLEGADIICA AVSDYDDVAS LPLLAESGVL TTVHHPAAGH
IVMPGFAIGG RSMAARRPPP RLGEHNSLLN EGPLPKLPAL ADTCRG