Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_3480 |
Symbol | |
ID | 7308845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 3597785 |
End bp | 3599005 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643601150 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_002498694 |
Protein GI | 220923392 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACGA CCCCGACTGC TGCCCAGGCC GCGGCTCCTG CCGCCCATCC ACTTGAGCGG ACGCTCGATG GCCTTCGCGT CATCGATTTC TCGCAGGTCG CCGCCGGGCC CCTATCGACG ATGATTCTCG CGGATCTGGG CGCGGATGTC ATCAAGATCG AGCCGCCAAC CGGCGATATC GGCCGGACGC TCGGGCCGCC CTTCATCGAA GGCGAGAGCA CGGTCTTCCT CTCGCTCAAC CGGAATAAGC GCAGCGTCAC GCTCGATCTG AAGTGCGAGG AGGGGCGGGC GCGCGCCCGC GCCCTGATCG CGACGGCCGA CATCCTCGTC GAGAGCTTCC GGCCCGGTGT TGCGGACCGG CTCGGTATCG GCTTCCAGGC GGCGCGGGCC ATCAACCCGC GGTTGATCTA CTGCTCGATC TCGGCCTACG GCCAGCATGG TTCCTGGTCC CACAAGCCCG GCGTCGATGG CGTCGTCCAG GCCGTATCTG GCCTCATGAG CGTGATCGGC CATGAGGGCG AGCCGCCTTC CAAGGTCCAG GCCCCCATCA TCGACATGGT GACGGGCTAC CATGCCGCCC TGGCGATCCT CGCCGCCGTC AACCAGCGCG CTGCCGGCTC GGTCCCCGGC CATCTCGATG TCAACATGTT CACGAGCGCG GTGATGCTCC AGCAGGTGAC GCTGTCCAGC TATCTAACCA CCGGGGAGCT GCCGGTGCGG TGCGGAAGCG GCGCGCCTTA CGCCACGCCG AACGAGGCAT ACCAGACCGC GGACGGCTAT GTTCTGGTCG CTGCCTATCA GCCGGAGCGC TGGCGCCGAC TCTGCGTCGC CCTCGACCGC CCCGATCTCG CTGATGACCC ACGCTTCGGC ACGCTGTCCG AGCGCATGGC CAATCGCGAC GCGCTGACGG CGGAGCTGAC CGGCGCGTTT CGCCACCGAC CCACGGGCGA ATGGGTCGCG AGGCTCGAAG GAGCCGACAT CATCTGCGCC GCCGTCTCGG ATTACGACGA CGTGGCAAGC CTGCCACTGC TGGCCGAGAG CGGAGTGCTG ACGACGGTCC ACCACCCCGC GGCAGGCCAT ATCGTCATGC CAGGCTTCGC GATAGGCGGC CGCTCCATGG CCGCGCGCCG GCCGCCCCCG CGGCTGGGCG AGCACAATTC GCTCCTGAAC GAGGGGCCAC TGCCAAAACT CCCGGCGCTG GCGGACACCT GCAGGGGGTA G
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Protein sequence | MTTTPTAAQA AAPAAHPLER TLDGLRVIDF SQVAAGPLST MILADLGADV IKIEPPTGDI GRTLGPPFIE GESTVFLSLN RNKRSVTLDL KCEEGRARAR ALIATADILV ESFRPGVADR LGIGFQAARA INPRLIYCSI SAYGQHGSWS HKPGVDGVVQ AVSGLMSVIG HEGEPPSKVQ APIIDMVTGY HAALAILAAV NQRAAGSVPG HLDVNMFTSA VMLQQVTLSS YLTTGELPVR CGSGAPYATP NEAYQTADGY VLVAAYQPER WRRLCVALDR PDLADDPRFG TLSERMANRD ALTAELTGAF RHRPTGEWVA RLEGADIICA AVSDYDDVAS LPLLAESGVL TTVHHPAAGH IVMPGFAIGG RSMAARRPPP RLGEHNSLLN EGPLPKLPAL ADTCRG
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