| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3376 |
|---|
| Symbol | |
|---|
| ID | 7308742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3491487 |
|---|
| End bp | 3492584 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643601055 |
|---|
| Product | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit |
|---|
| Protein accession | YP_002498599 |
|---|
| Protein GI | 220923297 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.530708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAGCC GAAGGGTAAA CCAGGATCTC CCCGTCGTCG CGCGCTTTGA GGTGCGCCAT
CGCAAATACC TCGCGCCAGA CGGCTCGATA GCCCGGCCGC TCCCCGCCTT CGCCTCCGAT
GCCAACCTGC TCATCGCGCT CTACCGGGCC ATGGTGCTGC TGCGCCTGTT TGACAAAAAG
GCTGTTGCAC TGCAGCGCAC CGGTCGGCTC GGGACTTACG CCGTTTCGCT CGGCCAAGAG
GCGGTATCGG TTGCGATAGC CAGTGCGATG CGAGAAGAAG ATGTGTTGTT ACCCTCCTAT
CGCGACAATG GCGCGCTGCT TTGGCGCGGC GTCAAGCTTG AAGAGATCCT GCTGTTTTGG
GGCGGGGACG AACGAGGCAA TTGTTTCTCC GGACCGGTCC ACGATTTTCC ATTCTGCGTT
CCCGTGGGAT CTCAGGCGCC TCATGCCGCC GGCGTCGCCT ATGCCTTGAA GCTGCGCAAG
AAGCCGCATG TCGCCGTGTG CCTGTTCGGC GATGGCGCCA CCTCGAAAGG CGACGTCTAC
GAAGCGATGA ATTTTGCCGG CGTGCACAAA TTGCCCGTCG TGTTCGTCAC CACCAACAAT
CAATGGGCCA TTTCGGTGCC GTTGCGACTG CAGACCAGTT CCGAAACGCT GGCGCAGAAG
GCCATCGCCG CGGGATTCAC CGGTGAGCAG GTCGATGGCA GTGACGTGGT GGCGATGCGC
GCCGCTGCCG AAGAGGCCAT TGCCGCAGCG CGTGACGGCA AAGGCCCCCG TTTCATCGAG
GCGGTCACCT ACCGCCTCGG CGACCATACA ACCTCCGATG ACGCATCACG CTATCGTTCG
GCTGACGAAG TCCAGGCGCG TTGGAAGGAA GAGCCGATCG CCCGCCTGAG GGCCTATCTC
GTTGCTCAAA AAATGTGGGG CAAAGCAGAC GAGGAGCGGC TCGCCACCGA GTGCCATGAG
CGCATCGAGG CGGCGGTCGA GCGTTATCTG GCAACGGCTC CGCGCCGGCC GGAAACCATG
TTCGATCACC TCTACGCCGA TCTACCCGAG GTCTATGCCG CACAGCGCCG CGAGCTCACG
GGAGAGCACG ATGCCTGA
|
|---|
| Protein sequence | MASRRVNQDL PVVARFEVRH RKYLAPDGSI ARPLPAFASD ANLLIALYRA MVLLRLFDKK
AVALQRTGRL GTYAVSLGQE AVSVAIASAM REEDVLLPSY RDNGALLWRG VKLEEILLFW
GGDERGNCFS GPVHDFPFCV PVGSQAPHAA GVAYALKLRK KPHVAVCLFG DGATSKGDVY
EAMNFAGVHK LPVVFVTTNN QWAISVPLRL QTSSETLAQK AIAAGFTGEQ VDGSDVVAMR
AAAEEAIAAA RDGKGPRFIE AVTYRLGDHT TSDDASRYRS ADEVQARWKE EPIARLRAYL
VAQKMWGKAD EERLATECHE RIEAAVERYL ATAPRRPETM FDHLYADLPE VYAAQRRELT
GEHDA
|
|---|
| |