| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3338 |
|---|
| Symbol | |
|---|
| ID | 7301763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3446890 |
|---|
| End bp | 3448671 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643601019 |
|---|
| Product | long-chain-acyl-CoA synthetase |
|---|
| Protein accession | YP_002498564 |
|---|
| Protein GI | 220923262 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTG CAGGCGCATC GGCTGCGCGG CAGGGCCCGT CGGCCGCTGC GGGCGGGTGG
CTCGGGGCGC TCGAACGCAC GTCCCGGATC GGCACGCAGC CGTCGCGAAT CCTGCCGCGG
GTCGTGGACG AGCTCGGCCT CGCCCACGGC GAGGCGCCGG CGCTGATCGG CGAGCAGGGC
ACGCTGAGCC ATGCCGGCCT GGCCGACCGG GCGCGGCGCT ACGCCCGCTG GGCACTCGCC
GAGGGCATCC GGGCCGGCGA CGCGGTGGCG CTCCTGATGC CGAACGGCCC CGACTACATG
GCGGCGTGGC TCGGGCTCAG CCGGGTCGGC CTGCGCGTCG CGCTCCTCAA CACGAACCTC
ACCGGCGCGA GCCTCGCCCA TTGCATCGCG GCCGCGGCGC CCACGCACCT GATCGTCGCG
GAGCGCCTGT GGCCTGCCTG CGAGGAGGCC GCGCCGCACC TGCCGGAGCG GCCGCGTCTC
GTCCGAGCCG ACGACCTCGC CGCCGCCCTG GCGCACTGCG ACGGCGGTCC GTTCGAGGAG
CGCGAGGAAC GCGCGGTGAC GCTCGCCGAC ACCGCCCTCT ACATCTACAC TTCGGGAACG
ACCGGCCTGC CCAAGGCCGC CCGGGTGAGC CACCACCGGG TGATGACCTG GAGCCACTGG
TTCGCCGGGC TGCTGGCGAC CGGGCCGGAG GACCGGCTCT ACACTTGCCT GCCGATGTAT
CACAGCGTCG GCGGCGTCGT GGCGACCGGG AGCGTCATCG TGGGCGGCGG GGCCGCCATC
CTGCGCGAGC GCTTTTCCGC GCGGCGCTTC TGGGACGACA TCGCGGCCGA GCGCTGCACC
CTGTTCCAGT ATATCGGCGA ACTCTGCCGC TATCTCCTCG CGGCACCCAC CCACCCGCTG
GAGCGGGCCC ATTCCCTGCG GATCGCCACC GGCAACGGCC TGCGGCCGGA GGTCTGGGAG
GCGTTCCAGG CACGGTTCGC CATTCCCCGC ATCCTCGAGT TCTACGCCGC GACCGAGGGC
ACGCTGTCGC TCTGCAATGT CGAGGGGCGG GTCGGCGCGG TGGGGCGGGT CCCTCCCTTC
CTGGCGCATT CCTCGCCGGC GGCGATCGTC CGCCACGATC CCGACACGGG CGCGCCGGCC
CGAGGGGCCG ACGGCTTCTG CCTGCGCTGC CCTCCCGGCG AGGCGGGCGA GCTGATCGGC
CGGCTCAGAA GCGAGGTCGG GAGCCAGCGC TTCGAGGGCT ATACCAGCGC GGCGGCGAGT
GACGCCAAGC TGCTGCGCGA CGTGTTCAAG CCGGGTGACG CGTGGTTCCG CACCGGGGAT
CTGATGCGGA TCGACCGGCA GGGCTTCTAC TTCTTCGTCG ACCGGGCCGG CGATACCTTC
CGCTGGAAGG GCGAGAACGT GGCGACGACG GAGGTAGCGG CGGCTTTGTC CGGTGCCGCC
GGGGTGGAGG AGGCGGCGGT CTACGGCGTG GCCGTTCCGG GGACGGAGGG CCGGGCCGGC
ATGGCGGCTC TCAAGGTCGG GCCCGGCTTC GATCTCGCCG TTCTGAGGGC GCATCTCGCC
GCGCAGCTGC CCGCCTATGC CCGCCCGCTC TTCCTGCGCC TTCGCGCCGG TTTCGAGATC
ACCGAGACCT TCAAGCAGAA GAAGCAGACG CTGCTGGCGG AGGGTTTCGA TCCGGCGCGG
ATCGCGGATC CGCTGTATTT CGAGGATGCG GCGGCGGGGG CCTACGTGCC GCTGACCGCG
GAACTCTACG CGGCGATCAC GCGCGGTGCC GTCCGGCTCT GA
|
|---|
| Protein sequence | MAVAGASAAR QGPSAAAGGW LGALERTSRI GTQPSRILPR VVDELGLAHG EAPALIGEQG
TLSHAGLADR ARRYARWALA EGIRAGDAVA LLMPNGPDYM AAWLGLSRVG LRVALLNTNL
TGASLAHCIA AAAPTHLIVA ERLWPACEEA APHLPERPRL VRADDLAAAL AHCDGGPFEE
REERAVTLAD TALYIYTSGT TGLPKAARVS HHRVMTWSHW FAGLLATGPE DRLYTCLPMY
HSVGGVVATG SVIVGGGAAI LRERFSARRF WDDIAAERCT LFQYIGELCR YLLAAPTHPL
ERAHSLRIAT GNGLRPEVWE AFQARFAIPR ILEFYAATEG TLSLCNVEGR VGAVGRVPPF
LAHSSPAAIV RHDPDTGAPA RGADGFCLRC PPGEAGELIG RLRSEVGSQR FEGYTSAAAS
DAKLLRDVFK PGDAWFRTGD LMRIDRQGFY FFVDRAGDTF RWKGENVATT EVAAALSGAA
GVEEAAVYGV AVPGTEGRAG MAALKVGPGF DLAVLRAHLA AQLPAYARPL FLRLRAGFEI
TETFKQKKQT LLAEGFDPAR IADPLYFEDA AAGAYVPLTA ELYAAITRGA VRL
|
|---|
| |