| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3309 |
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| Symbol | |
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| ID | 7301734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 3417194 |
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| End bp | 3419860 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643600990 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002498535 |
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| Protein GI | 220923233 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCG TCGTCGTCGA GTCGCCCGCC AAGGCCAAGA CGATCAACAA GTATCTCGGC
CACGGCTACG AGGTTCTGGC CTCCTTCGGG CATGTGCGCG ACCTGCCCGC CAAGGACGGC
TCGGTCGATC CCGAGCAGGA CTTCAAGATG CTCTGGGAGC TGGAGGACCG CGGCGCGAAG
CGGGTCTCGG AGATCGCCAG GGCGGTCAAG GGCGCCGACA AGCTGATCCT CGCCACCGAC
CCCGACCGCG AGGGCGAGGC GATCTCCTGG CACGTGCTGG AGGCGCTGCA GGCCAAGCGG
GTGCTCAAGG ACGTGTCCGT CGAGCGCGTG ACCTTCAACG CCATCACCAA GGACGCGGTC
CAGACGGCGA TGGCCCAGCC CAGGCAGATC GACCAGGCGC TGGTGGATGC CTATCTGGCC
CGCCGGGCTC TCGACTACCT CGTCGGCTTC AACCTCTCGC CGGTGCTGTG GCGCAAGCTG
CCGGGCGCGC GCTCGGCGGG CCGGGTGCAA TCGGTGGCCC TGCGCCTCGT CTGCGACCGC
GAGGCGGAGA TCGAGGCGTT CAGGCCGCGC GAATTCTGGT CGCTCGTCGC CACGCTCGCC
ACCGCCAGGG GCGCTGTGTT CGATGCGCGG CTCGTCGGCG CCGACGGCAA GCGCATCCAG
CGCCTCGATA TCGGCACGGC CGAGGAGGCG GAGGCGTTCC GGCGCGACCT CGAACTCGCC
ACCTTCACGG TGGGAAACGT CGAGGCGAAG CCCGCCAGGC GCCACCCGCA GCCGCCCTTC
ACCACCTCGA CCCTGCAGCA GGAGGCCTCC CGCAAGCTCG GGCTCGCCCC GGCCCAGACC
ATGCGCATCG CCCAGCGCCT CTACGAGGGC GTCGAGATCG GCGGCGAGAC GGTCGGCCTG
ATCACCTACA TGCGGACGGA CGGCGTCGAC ATGGCGCCGG AGGCGATCCA GGACGCGCGC
CGCGTCATCG GGGCCGAGTT CGGGGATGCC TACGTGCCCG CCGCGCCCCG CAGCTACAGC
GTCAAGGCGA AGAACGCCCA GGAGGCCCAC GAGGCCGTGC GCCCGACCGA TCTCGGCCGC
CTGCCCAAGG AGGTCGCCCG CTTCCTCGAA CCCGAGCAGG CCCGGCTCTA CGAGCTGATC
TGGATCCGCA CCGTCGCGAG CCAGATGGAA TCGGCCGAGC TCGAGCGCAC CACGGTCGAC
ATCGCCGCGC AGGTCGGCCC GCGCCGCCTC GACCTGCGCG CCACCGGGCA GGTGGTGAAG
TTCGACGGCT TCCTCACCCT CTACCAGGAG GGCAAGGACG ACGAGGAGGA CGAGGAATCC
CGCCGCCTGC CGTCCATGGC GGCGGGCGAG GCCTTGCGGC GCGAGCGCAT CGCCGCGACC
CAGCACTTCA CGGAGCCGCC GCCGCGCTAC TCGGAGGCGA GCCTCGTGAA GCGGATGGAG
GAACTCGGCA TCGGCCGTCC CTCCACCTAC GCCGCCGTGC TGCAGGTGCT GCGCGACCGC
GAATACGTGC GCCTGGACAA GAAGCGGCTC GTGCCGGAGG ACAAGGGGCG CCTCGTCACC
GGCTTCCTGG AGAGCTTCTT CCGGCGCTAC GTCGAGTACG ACTTCACGGC CGACCTGGAG
GAGCAGCTCG ACCGGATCTC GAACGCCGAG ATCGACTGGC GCGCCGTGCT GCGCGACTTC
TGGCGCGACT TCTCGGCGGC GATCGCCGGC ACCAAGGAGT TGCGCACCGC GGAGGTGCTG
GAGGCGCTCA ACCAGCTCCT CGGGCCGCAT ATCTTCCCGC CGCGTGCGGA CGGCGCGAAC
CCGCGCGCCT GCCCGAACTG CGCGAGCGGG ACGCTCTCGC TCAAGCTCGG CAAGTTCGGC
GCCTTCGTCG GCTGCTCGAA CTACCCGGAA TGCAAGTACA CCCGGCAGCT CTCGGCCGCG
GGAGTCGAGG GCGAGGGGGA CGGGAGTTCC GGCGAGGGCG GCCAGCCCGG CCAGCGCGTC
CTTGGCGAGG ACCCGGCAAC GGGCCTGCCC GTGACCCTGC GCGAGGGCCG CTTCGGCCCC
TTCGTGCAGC TCGGCGAGGC CTCGGCCGAG AAGGGCGCCG AGAAGCCCAA GCGCTCCTCG
CTGCCGCGCG GCCTCTCGCC CGCCGAGGTG TCGCTGGAGA CGGCGCTGAA GCTCCTCGCC
CTGCCGCGGG AAGTGGCGCG GCACCCCGAG ACCGGCGAGC CGATCCTGGT CAATCTCGGC
CGCTTCGGTC CCTACGTGCA GCACGGGAAG ACCTACGCCA ACCTGGGCAA GGGCGACGAT
CTCCTGGAGA TCGGCGCGAA CCGGGCGATC GACCTGATCG TCGCCAAGGA GCAGGGGGGC
GGGCGGCCGG CGGCCGATCC GGGCCGCGTC CTCGGCAACG ATCCCGAGAG CGGGCGCGCG
GTCACCGTGA AGGCCGGACG CTACGGGCCC TACGTGACGG ATGGCGAGGT GAACGCGACC
CTGCCGAAGG GCGCCGACCG CGACGCAATC ACGCTCGATG AGGCGCTCAG GCTGATCGCG
GCCCGGCGCG AGGCCGGCGG GGGCACCAAG AAGAAGGCGA CGACCCGCAC GCGCAAGTCC
GAGACCGCCG CGAAGCCGGC CGGGAAGGCC ACCAAGAAGG CGCCCACCAA GGCGAGCGCG
GCCAAGAAGA AGGCAGCCGC CGAATAG
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| Protein sequence | MKVVVVESPA KAKTINKYLG HGYEVLASFG HVRDLPAKDG SVDPEQDFKM LWELEDRGAK
RVSEIARAVK GADKLILATD PDREGEAISW HVLEALQAKR VLKDVSVERV TFNAITKDAV
QTAMAQPRQI DQALVDAYLA RRALDYLVGF NLSPVLWRKL PGARSAGRVQ SVALRLVCDR
EAEIEAFRPR EFWSLVATLA TARGAVFDAR LVGADGKRIQ RLDIGTAEEA EAFRRDLELA
TFTVGNVEAK PARRHPQPPF TTSTLQQEAS RKLGLAPAQT MRIAQRLYEG VEIGGETVGL
ITYMRTDGVD MAPEAIQDAR RVIGAEFGDA YVPAAPRSYS VKAKNAQEAH EAVRPTDLGR
LPKEVARFLE PEQARLYELI WIRTVASQME SAELERTTVD IAAQVGPRRL DLRATGQVVK
FDGFLTLYQE GKDDEEDEES RRLPSMAAGE ALRRERIAAT QHFTEPPPRY SEASLVKRME
ELGIGRPSTY AAVLQVLRDR EYVRLDKKRL VPEDKGRLVT GFLESFFRRY VEYDFTADLE
EQLDRISNAE IDWRAVLRDF WRDFSAAIAG TKELRTAEVL EALNQLLGPH IFPPRADGAN
PRACPNCASG TLSLKLGKFG AFVGCSNYPE CKYTRQLSAA GVEGEGDGSS GEGGQPGQRV
LGEDPATGLP VTLREGRFGP FVQLGEASAE KGAEKPKRSS LPRGLSPAEV SLETALKLLA
LPREVARHPE TGEPILVNLG RFGPYVQHGK TYANLGKGDD LLEIGANRAI DLIVAKEQGG
GRPAADPGRV LGNDPESGRA VTVKAGRYGP YVTDGEVNAT LPKGADRDAI TLDEALRLIA
ARREAGGGTK KKATTRTRKS ETAAKPAGKA TKKAPTKASA AKKKAAAE
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