Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_3279 |
Symbol | |
ID | 7301704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 3383142 |
End bp | 3384344 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643600960 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002498505 |
Protein GI | 220923203 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.463071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGCGC GGGTGATCGG GGCGGTCCTG CTGACGGCCG CTCTCGCCGC CGGAGGAGCC CAGGCGGGCG AGAAGGCCGT GAAGATCGGC GTGCTCACGG ATATGAGCGG CATCTACGCC GATTTCGGCG GGCGCGGATC GGCGCTGGCG GCCCAGATGG CGGCGGAGGA TTTCGGCGGC CGGGTCGGCA ACCTGCCGAT CGAGGTGGTT TCGGCCGACC ATCAGAACAA GGCCGATATC GGCTCGGCGC TCGCCCGGCG CTGGTTCGAC CAGGAGGGCG TCGACGTCAT CGCGGACGTG CCCACCTCCT CGGTGGCGCT GGCCGTGTCG GAGATCGCCC GCGAGAAGAA CAAGGTGCTG CTCGTCTCGG GCGCCGGCAC CTCGGACCTC ACGGGCAAGA ACTGCTCGCC CAATACGGTG CACTGGACCT ACGACACCTG GGCGCTGGCG AATTCCACCG GCGGCGCTCT GACCAAGGCC GGGTTCGACA CGTGGTACTT CATCACGGTC GACTATTCCT TCGGCTATGC GCTGGAGCGC GACGCGAGCG ACTCGCTGAC GGCGGCAGGT GGCCGGATCC TCGGCAAGGT GCGCCACCCG GTCGGCACGG GCGACTTCTC GTCCTTCCTG CTGCAGGCGC AAGGGTCGGG CGCCAAGGTG GTGGCGTTCG GCAATGCCGG CTCCGACACG ATCAACGGCG TCAAGCAGGC GGCGGAGTTC GGCCTCGTCC AGGGCGGGCA GAAGCTCGCC AGCATGCTGA TCACGCTGAG CGACATCCAT TCGCTCGGGC TCAAGGCCGC ACAGGGGCTG GTGCTGACGG AGGCCTTCTA CTGGGACCTC AACGAGGGCA CGCGCGCCTT CGCCAAGCAG TTCGCGGAAC GCAATGGCGG CGTCTACCCG AACATGGTGC ATGCGGGCGT CTACGGGGCC GTGCTGCATT ACCTGAAGGC GCGGGCGTCG GTGAACGGCG ACGACGGCAC GGCGGTCGTC CGGGAGATGA AGCGCCTCAA GACCGACGAT CCGCTCTTCG GCAAGGGCGA GGTGCGCAGC GACGGGCGGG CGACGCACGA CCTCCATCTC TTCGAGGTCA AGGCGCCGGC CGAGAGCAAG GGGCCCTACG ACTACTACAA GCACCTGCGC ACGGTCCCGG CCGCCGAGGC GTTCCGGCCG CTTGAGGCTG GCGGCTGCTC CCTCGTGAAC TGA
|
Protein sequence | MKARVIGAVL LTAALAAGGA QAGEKAVKIG VLTDMSGIYA DFGGRGSALA AQMAAEDFGG RVGNLPIEVV SADHQNKADI GSALARRWFD QEGVDVIADV PTSSVALAVS EIAREKNKVL LVSGAGTSDL TGKNCSPNTV HWTYDTWALA NSTGGALTKA GFDTWYFITV DYSFGYALER DASDSLTAAG GRILGKVRHP VGTGDFSSFL LQAQGSGAKV VAFGNAGSDT INGVKQAAEF GLVQGGQKLA SMLITLSDIH SLGLKAAQGL VLTEAFYWDL NEGTRAFAKQ FAERNGGVYP NMVHAGVYGA VLHYLKARAS VNGDDGTAVV REMKRLKTDD PLFGKGEVRS DGRATHDLHL FEVKAPAESK GPYDYYKHLR TVPAAEAFRP LEAGGCSLVN
|
| |