Gene Mnod_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3279 
Symbol 
ID7301704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3383142 
End bp3384344 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID643600960 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002498505 
Protein GI220923203 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.463071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGC GGGTGATCGG GGCGGTCCTG CTGACGGCCG CTCTCGCCGC CGGAGGAGCC 
CAGGCGGGCG AGAAGGCCGT GAAGATCGGC GTGCTCACGG ATATGAGCGG CATCTACGCC
GATTTCGGCG GGCGCGGATC GGCGCTGGCG GCCCAGATGG CGGCGGAGGA TTTCGGCGGC
CGGGTCGGCA ACCTGCCGAT CGAGGTGGTT TCGGCCGACC ATCAGAACAA GGCCGATATC
GGCTCGGCGC TCGCCCGGCG CTGGTTCGAC CAGGAGGGCG TCGACGTCAT CGCGGACGTG
CCCACCTCCT CGGTGGCGCT GGCCGTGTCG GAGATCGCCC GCGAGAAGAA CAAGGTGCTG
CTCGTCTCGG GCGCCGGCAC CTCGGACCTC ACGGGCAAGA ACTGCTCGCC CAATACGGTG
CACTGGACCT ACGACACCTG GGCGCTGGCG AATTCCACCG GCGGCGCTCT GACCAAGGCC
GGGTTCGACA CGTGGTACTT CATCACGGTC GACTATTCCT TCGGCTATGC GCTGGAGCGC
GACGCGAGCG ACTCGCTGAC GGCGGCAGGT GGCCGGATCC TCGGCAAGGT GCGCCACCCG
GTCGGCACGG GCGACTTCTC GTCCTTCCTG CTGCAGGCGC AAGGGTCGGG CGCCAAGGTG
GTGGCGTTCG GCAATGCCGG CTCCGACACG ATCAACGGCG TCAAGCAGGC GGCGGAGTTC
GGCCTCGTCC AGGGCGGGCA GAAGCTCGCC AGCATGCTGA TCACGCTGAG CGACATCCAT
TCGCTCGGGC TCAAGGCCGC ACAGGGGCTG GTGCTGACGG AGGCCTTCTA CTGGGACCTC
AACGAGGGCA CGCGCGCCTT CGCCAAGCAG TTCGCGGAAC GCAATGGCGG CGTCTACCCG
AACATGGTGC ATGCGGGCGT CTACGGGGCC GTGCTGCATT ACCTGAAGGC GCGGGCGTCG
GTGAACGGCG ACGACGGCAC GGCGGTCGTC CGGGAGATGA AGCGCCTCAA GACCGACGAT
CCGCTCTTCG GCAAGGGCGA GGTGCGCAGC GACGGGCGGG CGACGCACGA CCTCCATCTC
TTCGAGGTCA AGGCGCCGGC CGAGAGCAAG GGGCCCTACG ACTACTACAA GCACCTGCGC
ACGGTCCCGG CCGCCGAGGC GTTCCGGCCG CTTGAGGCTG GCGGCTGCTC CCTCGTGAAC
TGA
 
Protein sequence
MKARVIGAVL LTAALAAGGA QAGEKAVKIG VLTDMSGIYA DFGGRGSALA AQMAAEDFGG 
RVGNLPIEVV SADHQNKADI GSALARRWFD QEGVDVIADV PTSSVALAVS EIAREKNKVL
LVSGAGTSDL TGKNCSPNTV HWTYDTWALA NSTGGALTKA GFDTWYFITV DYSFGYALER
DASDSLTAAG GRILGKVRHP VGTGDFSSFL LQAQGSGAKV VAFGNAGSDT INGVKQAAEF
GLVQGGQKLA SMLITLSDIH SLGLKAAQGL VLTEAFYWDL NEGTRAFAKQ FAERNGGVYP
NMVHAGVYGA VLHYLKARAS VNGDDGTAVV REMKRLKTDD PLFGKGEVRS DGRATHDLHL
FEVKAPAESK GPYDYYKHLR TVPAAEAFRP LEAGGCSLVN